Protein Alignment CG11454 and Rbm39

DIOPT Version :10

• Sequence 1: NP_608497.1
• Gene: CG11454 / 33175
• FlyBaseID: FBgn0031224
• Length: 238
• Species: Drosophila melanogaster
• Sequence 2: XP_006235393.1
• Gene: Rbm39 / 362251
• RGDID: 1310071
• Length: 530
• Species: Rattus norvegicus
• Alignment Length: 160
• Identity: 41/160 - (25%)
• Similarity: 63/160 - (39%)
• Gaps: 18/160 - (11%)

  Fly    60 DDDEEEDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDNNG-RPRNFGFVTYQRLCAV 123
            |:...|:.:.||:||..|..|:....|.|.|...|.:..||:.:|.|. |.:...:|.:..:.:|
  Rat   143 DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSV 207

  Fly   124 PFALDLYQGLELFQKKVTIK-QQGGKQLPAYNQSRLRNQFMMEALPQPSPLRHARHSLHNGKPYD 187
            |.|:.| .|..:....:.:: .|..|...|...:.|:.       ....|:|....|||.....|
  Rat   208 PLAIGL-TGQRVLGVPIIVQASQAEKNRAAAMANNLQK-------GSAGPMRLYVGSLHFNITED 264

  Fly   188 R-----NPFGHNADQRRRSDSSVMERNRLK 212
            .     .|||.....:...||   |..|.|
  Rat   265 MLRGIFEPFGRIESIQLMMDS---ETGRSK 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11454	NP_608497.1	RRM_RBM7_like	69..143	CDD:409773	21/74 (28%)
Rbm39	XP_006235393.1	SF-CC1	46..518	CDD:273721	41/160 (26%)