DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and Rbmx2

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_775552.1 Gene:Rbmx2 / 209003 MGIID:1919414 Length:326 Species:Mus musculus


Alignment Length:290 Identity:59/290 - (20%)
Similarity:90/290 - (31%) Gaps:107/290 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NENGDQLVGQLEDDDDEEEDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVRIPTD-NNGRPR 110
            ||...|| |..|......|.:....:|.|.|...:||..:..||.|.|.|..:.:..| ..|:.:
Mouse    14 NEREVQL-GVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSK 77

  Fly   111 NFGFVTYQRLCAVPFALDLYQGL-----------------------------ELFQK-------- 138
            .|.|:.|:...:...|:|.:.|:                             ||.:|        
Mouse    78 GFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQESEDVDDVTRELQEKGCGVKTPP 142

  Fly   139 ------------KVTIK-QQGGKQLPAYNQSRLRNQFMMEALPQPSPLRHA------------RH 178
                        |:|.| ::..|:.....:.:...|...|   |||..|.|            :|
Mouse   143 SSPPEVSEDEDAKLTKKHKKDKKEKKKRKKEKTEGQAQAE---QPSCSRSATVKEKKDERASRKH 204

  Fly   179 S-----------------LHNGKPYDRNPF------------------GHNADQRRRSDSSVMER 208
            |                 .|:|.|..|:.:                  .|.:..||.::....||
Mouse   205 SSKTSERAQKSEHRESKKSHSGSPDGRSSYHARAEDPECKARKEKPKHEHKSASRREAEEKSRER 269

  Fly   209 NRLKPQ-----QHHQHMQGGSRRSDQRSNN 233
            .|.:..     :|..|..|.|.||..||.:
Mouse   270 ERGRSSGTHSGRHRGHSDGRSHRSRSRSRS 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 23/123 (19%)
Rbmx2NP_775552.1 RRM_ist3_like 27..115 CDD:409845 19/87 (22%)
PHA03307 113..>284 CDD:223039 27/173 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..326 34/186 (18%)
U2AF_lg 259..>324 CDD:273727 13/41 (32%)

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