DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and rbmx-2

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_495237.1 Gene:rbmx-2 / 183040 WormBaseID:WBGene00016245 Length:302 Species:Caenorhabditis elegans


Alignment Length:184 Identity:38/184 - (20%)
Similarity:77/184 - (41%) Gaps:19/184 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTD-NNGRPRNFGFVTYQRLCAVPFALDLYQGLEL 135
            ::.|.|...::|..:..||.|.|.:..:.:..| :.|:.:.|.|:.|:...:...|:|.:.|:.|
 Worm    40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISL 104

  Fly   136 FQKKVTIKQQGGKQLPAYNQ------SRLRNQ------FMMEALP---QPSPLRHARHSLHNGKP 185
            .::.:.:......::|.|.:      .||..:      .|.||.|   |...::.|:..|.:...
 Worm   105 HKRMIRVDHVEEYKVPKYKEDADDETKRLWEEGCAPKPVMREAAPMEVQEQRIKKAKEVLLDIGD 169

  Fly   186 YDRNPFGH-NADQRRRSDSSVMERNRLKPQQHHQHMQGGSRRSDQRSNNKRRLL 238
            .|...... ..|:::.......|:.|.|..:..:  :..:|..|...|||.:|:
 Worm   170 VDEELLKKIKKDKKKAKKEKKREKKRAKKIRKLE--KKAARDPDGDWNNKAKLI 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 16/71 (23%)
rbmx-2NP_495237.1 RRM_ist3_like 29..117 CDD:409845 16/76 (21%)

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