DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and rbm-39

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_500025.1 Gene:rbm-39 / 176922 WormBaseID:WBGene00021921 Length:580 Species:Caenorhabditis elegans


Alignment Length:79 Identity:20/79 - (25%)
Similarity:40/79 - (50%) Gaps:4/79 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 NLDERVTEEILYEVFLQAGPIEGVRIPTDNNGRPRNFGFVTYQRLCAVPFALDLYQGLELFQK-- 138
            ||..::.|:::.::|...|.||.:.:..|:|...|.|..:|::.......:.:.....||..:  
 Worm   278 NLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGRCI 342

  Fly   139 KVTIKQQGGKQLPA 152
            :::|||:  .|.||
 Worm   343 RLSIKQE--SQAPA 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 14/68 (21%)
rbm-39NP_500025.1 SF-CC1 140..515 CDD:273721 20/79 (25%)

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