DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and CSTF2

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001293135.1 Gene:CSTF2 / 1478 HGNCID:2484 Length:597 Species:Homo sapiens


Alignment Length:161 Identity:39/161 - (24%)
Similarity:63/161 - (39%) Gaps:24/161 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 DEEEDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVRIPTD-NNGRPRNFGFVTYQRLCAVPF 125
            |...|...|::|.||:....|||.|.::|.:.||:...|:..| ..|:|:.:||..||.......
Human     8 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALS 72

  Fly   126 ALDLYQGLELFQKKVTIKQQGGKQLPAYNQSRLRNQFMMEALPQPSPLRHARHSLHNGKPYDRNP 190
            |:....|.|.          .|:.|...|.:..:|:..::             ||..|.|...:|
Human    73 AMRNLNGREF----------SGRALRVDNAASEKNKEELK-------------SLGTGAPVIESP 114

  Fly   191 FGHNADQRRRSDSSVMERNRLKPQQHHQHMQ 221
            :|.........:|.......|.|:|..:.|:
Human   115 YGETISPEDAPESISKAVASLPPEQMFELMK 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 22/74 (30%)
CSTF2NP_001293135.1 PABP-1234 4..352 CDD:130689 39/161 (24%)
RRM_CSTF2_CSTF2T 10..94 CDD:410072 26/93 (28%)
CSTF2_hinge 112..191 CDD:433869 7/34 (21%)
PHA03378 <253..455 CDD:223065
CSTF_C 553..593 CDD:464130
Blue background indicates that the domain is not in the aligned region.

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