DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and SNQ2

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_010294.1 Gene:SNQ2 / 851574 SGDID:S000002418 Length:1501 Species:Saccharomyces cerevisiae


Alignment Length:587 Identity:156/587 - (26%)
Similarity:256/587 - (43%) Gaps:129/587 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 EGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKTSSIEGSVTMNGAERNLSAF 122
            ||.:   :.:|..|||....|.:||:||.|||||:||||.|:......|.|.:.:||...:.| |
Yeast   865 EGGK---RMLLDNVSGYCIPGTMTALMGESGAGKTTLLNTLAQRNVGIITGDMLVNGRPIDAS-F 925

  Fly   123 RKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILLTLSLSEHRYTMTRNLS 187
            .:.:.|:.|.:.....|||:|::..:..::..:.....||...::.|:..|.:.|:...:...:.
Yeast   926 ERRTGYVQQQDIHIAELTVRESLQFSARMRRPQHLPDSEKMDYVEKIIRVLGMEEYAEALVGEVG 990

  Fly   188 GG----QKKRLSIALELVSNPP-IMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSA 247
            .|    |:|:|||.:|||:.|. ::|.|||||||||.:.:..|.||:.|:..|::::||||||||
Yeast   991 CGLNVEQRKKLSIGVELVAKPDLLLFLDEPTSGLDSQSSWAIIQLLRKLSKAGQSILCTIHQPSA 1055

  Fly   248 RLFEMFDQLYTL-ADGQCVYQGST-KQLVPFLSTLN----LECPSYHNPASYVIE-VSCGEHGDH 305
            .|||.||:|..| ..||.||.|.. |.....|:...    .:|.|..|||.|::| :..|     
Yeast  1056 TLFEEFDRLLLLRKGGQTVYFGDIGKNSATILNYFERNGARKCDSSENPAEYILEAIGAG----- 1115

  Fly   306 TRKLVDAIDNGKRDVR----SSADYAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLNN 366
                  |..:.|.|..    :|.::...|.     |||:|                         
Yeast  1116 ------ATASVKEDWHEKWLNSVEFEQTKE-----KVQDL------------------------- 1144

  Fly   367 GLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERYPTSQFHQFWVV 431
                  :||:.|:       .|.:|.||                     .|.:|.||..:||..|
Yeast  1145 ------INDLSKQ-------ETKSEVGD---------------------KPSKYATSYAYQFRYV 1175

  Fly   432 LKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLGFLFFNMLFLMYTSMTIT 496
            |.||....:|....:..::...|:.|..||..::::|.      |.:|..  |.:|..:.|:   
Yeast  1176 LIRTSTSFWRSLNYIMSKMMLMLVGGLYIGFTFFNVGK------SYVGLQ--NAMFAAFISI--- 1229

  Fly   497 ILSFPLEMPVL-----------LKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIVYYFTSQ 550
            |||.|....:.           ::|:.:..:......:...:::||:...|..|:....|:....
Yeast  1230 ILSAPAMNQIQGRAIASRELFEVRESQSNMFHWSLVLITQYLSELPYHLFFSTIFFVSSYFPLRI 1294

  Fly   551 PWELFRFSM-FLSACLLISFVAQSVGLVV------GAAMNVQNGVFLAPVMSV-----PFLLFSG 603
            .:|..|.:: ||:.|::.......:||::      ..:.||..|:.|:.::|.     |..|..|
Yeast  1295 FFEASRSAVYFLNYCIMFQLYYVGLGLMILYMSPNLPSANVILGLCLSFMLSFCGVTQPVSLMPG 1359

  Fly   604 FF 605
            |:
Yeast  1360 FW 1361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 82/215 (38%)
3a01204 60..699 CDD:273361 154/585 (26%)
ABC2_membrane 431..630 CDD:279410 41/198 (21%)
SNQ2NP_010294.1 3a01205 103..1480 CDD:273362 156/587 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I1517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
TreeFam 00.000 Not matched by this tool.
43.940

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