DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG25

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_565030.1 Gene:ABCG25 / 843527 AraportID:AT1G71960 Length:662 Species:Arabidopsis thaliana


Alignment Length:728 Identity:183/728 - (25%)
Similarity:323/728 - (44%) Gaps:126/728 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NNLLGTAGAGQLKAQIVPAQPKTLQHLPKRPAVDLAFHNLTYRVKEGNRSN-------------- 63
            |.:.|...:.:|...  |.:|::|......| :.|.|.::.||||....||              
plant     9 NQMNGPDSSPRLSQD--PREPRSLLSSSCFP-ITLKFVDVCYRVKIHGMSNDSCNIKKLLGLKQK 70

  Fly    64 ---------AKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSG-YKTSSIEGSVTMNGAERN 118
                     .:|||.||:|.:..||..|::||||:|||||||.::| ...|::.|.:.:|..:..
plant    71 PSDETRSTEERTILSGVTGMISPGEFMAVLGPSGSGKSTLLNAVAGRLHGSNLTGKILINDGKIT 135

  Fly   119 LSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILLTLSLSEHRYTMT 183
            ....:: :.::.||:.|:.:|||:|.:.....|:|.:..::..|....:.::..|.|::...|:.
plant   136 KQTLKR-TGFVAQDDLLYPHLTVRETLVFVALLRLPRSLTRDVKLRAAESVISELGLTKCENTVV 199

  Fly   184 -----RNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAAG-GRTVICTI 242
                 |.:|||::||:|||.||:.||.::..||||||||::...:.:..|..||.| |:||:.:|
plant   200 GNTFIRGISGGERKRVSIAHELLINPSLLVLDEPTSGLDATAALRLVQTLAGLAHGKGKTVVTSI 264

  Fly   243 HQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHNPASYVIEVS---CGEHGD 304
            ||||:|:|:|||.:..|::|:|::.|..:..:.:..::........|||.::::::   |...|.
plant   265 HQPSSRVFQMFDTVLLLSEGKCLFVGKGRDAMAYFESVGFSPAFPMNPADFLLDLANGVCQTDGV 329

  Fly   305 HTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLNNGLL 369
            ..|:        |.:||.:     |....|.:....:|..::.:...       :||.......:
plant   330 TERE--------KPNVRQT-----LVTAYDTLLAPQVKTCIEVSHFP-------QDNARFVKTRV 374

  Fly   370 NGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERYPTSQFHQFWVVLKR 434
            ||        |.:::.:.|                                   .|.|..::|.|
plant   375 NG--------GGITTCIAT-----------------------------------WFSQLCILLHR 396

  Fly   435 TLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLGFLFFNMLFLMYTSMTITILS 499
             ||...|..:...||:|..:....|.|.:::.  :|...|...||.|||..:|.........:.:
plant   397 -LLKERRHESFDLLRIFQVVAASILCGLMWWH--SDYRDVHDRLGLLFFISIFWGVLPSFNAVFT 458

  Fly   500 FPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIVYYFTSQPWELFRFSMFLSAC 564
            ||.|..:..:|..:..|:|.||::|..:..|..:.:....:::..|:.......:..|.:.||..
plant   459 FPQERAIFTRERASGMYTLSSYFMAHVLGSLSMELVLPASFLTFTYWMVYLRPGIVPFLLTLSVL 523

  Fly   565 LLISFVAQSVGLVVGAA-MNVQNGVFLAPVMSVPFLLFSGFFVSFDAIPVYLRWITYLSYIRYGF 628
            ||....:|.:||.:||| |:.:....:..|..:.|:|..|::|  :.:|..:.|:.|:|...|.:
plant   524 LLYVLASQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGYYV--NKVPSGMVWMKYVSTTFYCY 586

  Fly   629 EGTALATYGYGREKLRCF--------------QTYCHFKSPITTLEELDMVNANFTLDIVALIVI 679
            .......||.|.|.||..              ...|.|      :||..:.:......:..|.::
plant   587 RLLVAIQYGSGEEILRMLGCDSKGKQGASAATSAGCRF------VEEEVIGDVGMWTSVGVLFLM 645

  Fly   680 FVVLRISAYLFLR 692
            |...|:.|||.||
plant   646 FFGYRVLAYLALR 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 86/253 (34%)
3a01204 60..699 CDD:273361 170/681 (25%)
ABC2_membrane 431..630 CDD:279410 51/199 (26%)
ABCG25NP_565030.1 PLN03211 1..662 CDD:215634 183/728 (25%)
ABCG_EPDR 70..290 CDD:213180 78/220 (35%)
ABC2_membrane 393..592 CDD:279410 51/203 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2816
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.720

Return to query results.
Submit another query.