DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG10

DIOPT Version :10

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0288229 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_175734.1 Gene:ABCG10 / 841761 AraportID:AT1G53270 Length:590 Species:Arabidopsis thaliana


Alignment Length:629 Identity:175/629 - (27%)
Similarity:273/629 - (43%) Gaps:151/629 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NLTYRVKEGN------------RSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKT 103
            ||:||: .||            ....|.|||.||...||.|:|||.|||||||:|||.||:| |.
plant    23 NLSYRI-GGNTPKFSNLCGLLSEKEEKVILKDVSCDARSAEITAIAGPSGAGKTTLLEILAG-KV 85

  Fly   104 S--SIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMI 166
            |  .:.|.|.:||...:...:|::|.::.|::.|...|||||.:|.:..|:|..|  :.:..:.:
plant    86 SHGKVSGQVLVNGRPMDGPEYRRVSGFVPQEDALFPFLTVQETLTYSALLRLKTK--RKDAAAKV 148

  Fly   167 DDILLTLSLSEH------RYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCI 225
            ..::..|.| ||      .......:|||:::|:||.:|||.:|.::..|||||||||::..|.:
plant   149 KRLIQELGL-EHVADSRIGQGSRSGISGGERRRVSIGVELVHDPNVILIDEPTSGLDSASALQVV 212

  Fly   226 HLLK-MLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHN 289
            .||| |....|:|::.|||||..|:.|..|::..|::|..|..||...|...:.....:.|...|
plant   213 TLLKDMTIKQGKTIVLTIHQPGFRILEQIDRIVLLSNGMVVQNGSVYSLHQKIKFSGHQIPRRVN 277

  Fly   290 PASYVI---------------EVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQ 339
            ...|.|               |:||..|              .:..:|....||           
plant   278 VLEYAIDIAGSLEPIRTQSCREISCYGH--------------SKTWKSCYISAG----------- 317

  Fly   340 NLKAILDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVN 404
               ..|.::|:.|                     |.:::|                 :.:....:
plant   318 ---GELHQSDSHS---------------------NSVLEE-----------------VQILGQRS 341

  Fly   405 CTTALLTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGN 469
            |.....|:::.:......|                               :.|.::|::|.::||
plant   342 CKNIFRTKQLFTTRALQAS-------------------------------IAGLILGSIYLNVGN 375

  Fly   470 D--GAKVLSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPF 532
            .  .|||| ..||..|.:.||: :|.|..:..|..:..:|::|...|.|.:.||.||.::..:||
plant   376 QKKEAKVL-RTGFFAFILTFLL-SSTTEGLPIFLQDRRILMRETSRRAYRVLSYVLADTLIFIPF 438

  Fly   533 QAIFCVIYVSIVYYFTSQPWEL---FRFSMFLSACLLI--SFVAQSVGLVVGAAMNVQNGVFLAP 592
            ..|..:::.:.||:......||   ..||:.:...||:  ||||....||....|    |..:..
plant   439 LLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIM----GTSVIS 499

  Fly   593 VMSVPFLLFSGFFVSFDAIPVYLRWITYLSYIRYGFEGTALATY 636
            .:...|.||||:|::.|.||||..::.|||..:|.||...:..|
plant   500 GLMGSFFLFSGYFIAKDRIPVYWEFMHYLSLFKYPFECLMINEY 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 3a01204 60..699 CDD:273361 170/620 (27%)
ABCG10NP_175734.1 3a01204 27..589 CDD:273361 172/625 (28%)

Return to query results.
Submit another query.