DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG12

DIOPT Version :10

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0288229 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_175561.1 Gene:ABCG12 / 841575 AraportID:AT1G51500 Length:687 Species:Arabidopsis thaliana


Alignment Length:696 Identity:188/696 - (27%)
Similarity:324/696 - (46%) Gaps:120/696 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LAFHNLTYRVKEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKTSSI--EGS 109
            ||:.:||..:...:....:.:|.|::|....|.:.|||||||:||||||:.|:|....::  .|:
plant    24 LAWEDLTVVIPNFSGGPTRRLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVIMTGN 88

  Fly   110 VTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILLTLS 174
            :.:||.:..|.  ..|.||:.|::.|.|.|||:|.:|.:.:|:||...:|.|.:.:::..::.|.
plant    89 LLLNGKKARLD--YGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELG 151

  Fly   175 LSE---------HRYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKM 230
            |.:         |    :|.:|||::||:|:|||:::.|.|:|.|||||||||::.|..|..|:.
plant   152 LQDCADRVIGNWH----SRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRN 212

  Fly   231 LAA-GGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHNPASYV 294
            :|. |||||:.:|||||:.:|.:||.|:.|:.|:.||.|.:|..|.|.:.....||...||:   
plant   213 IARDGGRTVVSSIHQPSSEVFALFDDLFLLSSGETVYFGESKFAVEFFAEAGFPCPKKRNPS--- 274

  Fly   295 IEVSCGEHGDHTRKLVDA-IDNGKRDVRSSADYAGLKARND---LVKVQNLKAILDKNDASSVSG 355
                     ||..:.::: .|.....::.|.......|.:|   .:....:||.|.:|...||..
plant   275 ---------DHFLRCINSDFDTVTATLKGSQRIRETPATSDPLMNLATSEIKARLVENYRRSVYA 330

  Fly   356 RKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERY 420
            :..:..               ::|        ..:..|...::|.|....|              
plant   331 KSAKSR---------------IRE--------LASIEGHHGMEVRKGSEAT-------------- 358

  Fly   421 PTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNL---GFLF 482
               .|.|...:.||:.:...||....:.|:..:::|.|.:|.::||:|:....:|:.:   ||:.
plant   359 ---WFKQLRTLTKRSFVNMCRDIGYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFIT 420

  Fly   483 FNMLFLMYTSMTITILSFPL---EMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIV 544
            ..|.|:       :|..||.   ||.|..||..:.:|.:..|.::..|:..||.....:|..||.
plant   421 GFMTFM-------SIGGFPSFIEEMKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSIT 478

  Fly   545 YYFTS-QP----WELFRFSMFLSACLLISFVAQSVGLVVGAAMNVQNGVFLAPVMSVPFLLFSGF 604
            |.... :|    |..|..::|.|..::.|.:.....||....|.:..|..:..::    ::.|||
plant   479 YNMVKFRPGVSHWAFFCLNIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGII----MMTSGF 539

  Fly   605 FVSFDAIP-VYLRW-ITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHFKSPITTLEELDMVNA 667
            |.....:| |:.|: |:::||..:..:|      .|..:.|...........|..|.|:  ::|.
plant   540 FRLLPDLPKVFWRYPISFMSYGSWAIQG------AYKNDFLGLEFDPMFAGEPKMTGEQ--VINK 596

  Fly   668 NFTL--------DIVALIVIFVVLRISAYLFLRWK------LKTVR 699
            .|.:        |:.|:::|.|..||..::.|:.|      ||.::
plant   597 IFGVQVTHSKWWDLSAIVLILVCYRILFFIVLKLKERAEPALKAIQ 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 3a01204 60..699 CDD:273361 184/681 (27%)
ABCG12NP_175561.1 3a01204 40..635 CDD:273361 182/671 (27%)

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