DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG12

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_175561.1 Gene:ABCG12 / 841575 AraportID:AT1G51500 Length:687 Species:Arabidopsis thaliana


Alignment Length:696 Identity:188/696 - (27%)
Similarity:324/696 - (46%) Gaps:120/696 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LAFHNLTYRVKEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKTSSI--EGS 109
            ||:.:||..:...:....:.:|.|::|....|.:.|||||||:||||||:.|:|....::  .|:
plant    24 LAWEDLTVVIPNFSGGPTRRLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVIMTGN 88

  Fly   110 VTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILLTLS 174
            :.:||.:..|.  ..|.||:.|::.|.|.|||:|.:|.:.:|:||...:|.|.:.:::..::.|.
plant    89 LLLNGKKARLD--YGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELG 151

  Fly   175 LSE---------HRYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKM 230
            |.:         |    :|.:|||::||:|:|||:::.|.|:|.|||||||||::.|..|..|:.
plant   152 LQDCADRVIGNWH----SRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRN 212

  Fly   231 LAA-GGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHNPASYV 294
            :|. |||||:.:|||||:.:|.:||.|:.|:.|:.||.|.:|..|.|.:.....||...||:   
plant   213 IARDGGRTVVSSIHQPSSEVFALFDDLFLLSSGETVYFGESKFAVEFFAEAGFPCPKKRNPS--- 274

  Fly   295 IEVSCGEHGDHTRKLVDA-IDNGKRDVRSSADYAGLKARND---LVKVQNLKAILDKNDASSVSG 355
                     ||..:.::: .|.....::.|.......|.:|   .:....:||.|.:|...||..
plant   275 ---------DHFLRCINSDFDTVTATLKGSQRIRETPATSDPLMNLATSEIKARLVENYRRSVYA 330

  Fly   356 RKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERY 420
            :..:..               ::|        ..:..|...::|.|....|              
plant   331 KSAKSR---------------IRE--------LASIEGHHGMEVRKGSEAT-------------- 358

  Fly   421 PTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNL---GFLF 482
               .|.|...:.||:.:...||....:.|:..:::|.|.:|.::||:|:....:|:.:   ||:.
plant   359 ---WFKQLRTLTKRSFVNMCRDIGYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFIT 420

  Fly   483 FNMLFLMYTSMTITILSFPL---EMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIV 544
            ..|.|:       :|..||.   ||.|..||..:.:|.:..|.::..|:..||.....:|..||.
plant   421 GFMTFM-------SIGGFPSFIEEMKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSIT 478

  Fly   545 YYFTS-QP----WELFRFSMFLSACLLISFVAQSVGLVVGAAMNVQNGVFLAPVMSVPFLLFSGF 604
            |.... :|    |..|..::|.|..::.|.:.....||....|.:..|..:..::    ::.|||
plant   479 YNMVKFRPGVSHWAFFCLNIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGII----MMTSGF 539

  Fly   605 FVSFDAIP-VYLRW-ITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHFKSPITTLEELDMVNA 667
            |.....:| |:.|: |:::||..:..:|      .|..:.|...........|..|.|:  ::|.
plant   540 FRLLPDLPKVFWRYPISFMSYGSWAIQG------AYKNDFLGLEFDPMFAGEPKMTGEQ--VINK 596

  Fly   668 NFTL--------DIVALIVIFVVLRISAYLFLRWK------LKTVR 699
            .|.:        |:.|:::|.|..||..::.|:.|      ||.::
plant   597 IFGVQVTHSKWWDLSAIVLILVCYRILFFIVLKLKERAEPALKAIQ 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 90/232 (39%)
3a01204 60..699 CDD:273361 184/681 (27%)
ABC2_membrane 431..630 CDD:279410 53/211 (25%)
ABCG12NP_175561.1 3a01204 40..635 CDD:273361 182/671 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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