DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG14

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_564383.1 Gene:ABCG14 / 840064 AraportID:AT1G31770 Length:648 Species:Arabidopsis thaliana


Alignment Length:678 Identity:188/678 - (27%)
Similarity:320/678 - (47%) Gaps:106/678 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 VDLAFHNLTYRVK-------EGN-RSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGY 101
            :.|.|..:.|:||       .|: :|..||||.|::|.:..||..|::||||:||:|||:.|.|.
plant    51 ITLKFEEVVYKVKIEQTSQCMGSWKSKEKTILNGITGMVCPGEFLAMLGPSGSGKTTLLSALGGR 115

  Fly   102 KTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMI 166
            .:.:..|.|..||...: ...::.:.::.||:.|:.:|||.|.:.....|:|....::.||...:
plant   116 LSKTFSGKVMYNGQPFS-GCIKRRTGFVAQDDVLYPHLTVWETLFFTALLRLPSSLTRDEKAEHV 179

  Fly   167 DDILLTLSLSEHRYTMT-----RNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIH 226
            |.::..|.|:....:|.     |.:|||:|||:||..|::.||.::..|||||||||:|..:.:.
plant   180 DRVIAELGLNRCTNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVT 244

  Fly   227 LLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHNPA 291
            .:|.||:|||||:.||||||:|::.|||::..|::|..:|.|:....|.:.|:|........|||
plant   245 TIKRLASGGRTVVTTIHQPSSRIYHMFDKVVLLSEGSPIYYGAASSAVEYFSSLGFSTSLTVNPA 309

  Fly   292 SYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVSGR 356
            ..:::::.|...|..::..:                                             
plant   310 DLLLDLANGIPPDTQKETSE--------------------------------------------- 329

  Fly   357 KYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEIT------ 415
              ::..|:...|::..      |.|:|:.|              |:..|.....:.|.|      
plant   330 --QEQKTVKETLVSAY------EKNISTKL--------------KAELCNAESHSYEYTKAAAKN 372

  Fly   416 -SPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLG 479
             ..|::.|:.::||.|:|:|.:. ..|..:...||:|..:.|.||.|.|::.  ...:.:.....
plant   373 LKSEQWCTTWWYQFTVLLQRGVR-ERRFESFNKLRIFQVISVAFLGGLLWWH--TPKSHIQDRTA 434

  Fly   480 FLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIV 544
            .|||..:|..:..:...:.:||.|..:|:||..:..|.|.||::|.:|.|||.:......:|.|:
plant   435 LLFFFSVFWGFYPLYNAVFTFPQEKRMLIKERSSGMYRLSSYFMARNVGDLPLELALPTAFVFII 499

  Fly   545 YYFTSQPWELFRFSMFLSACLLISFVAQSVGLVVGA-AMNVQNGVFLAPVMSVPFLLFSGFFVSF 608
            |:......:...|.:.|...|....|||.:||..|| .||::....||.|.::.||:..|::|  
plant   500 YWMGGLKPDPTTFILSLLVVLYSVLVAQGLGLAFGALLMNIKQATTLASVTTLVFLIAGGYYV-- 562

  Fly   609 DAIPVYLRWITYLSYIRYGFE---GTALATYGYGREKLRCFQ-TYCHFKSPITTLEELDMVNANF 669
            ..||.::.|:.||||..|.::   |.......|    ..|.: .:|.. .....::.:.:  .|.
plant   563 QQIPPFIVWLKYLSYSYYCYKLLLGIQYTDDDY----YECSKGVWCRV-GDFPAIKSMGL--NNL 620

  Fly   670 TLDIVALIVIFVVLRISAYLFL-RWKLK 696
            .:|:..:.|:.|..|:.||:.| |.||:
plant   621 WIDVFVMGVMLVGYRLMAYMALHRVKLR 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 89/235 (38%)
3a01204 60..699 CDD:273361 182/656 (28%)
ABC2_membrane 431..630 CDD:279410 60/202 (30%)
ABCG14NP_564383.1 PLN03211 10..646 CDD:215634 186/674 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2816
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.720

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