DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and ABCG28

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_200882.4 Gene:ABCG28 / 836195 AraportID:AT5G60740 Length:1109 Species:Arabidopsis thaliana


Alignment Length:676 Identity:185/676 - (27%)
Similarity:297/676 - (43%) Gaps:129/676 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNQYSW------KQFLENNNLLGTAGAGQLKAQIVPAQPKTLQHLPKRPAVDLAFHNLTYRVKEG 59
            |.:|::      |...|.|..|..:|...:...|         .:.|||.:::||.:|:..:|..
plant   456 MFRYAYGQIEKEKAMQEQNKNLTFSGVISMANDI---------DIRKRPMIEVAFKDLSITLKGK 511

  Fly    60 NRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKTSSI-EGSVTMNGAERNLSAFR 123
            |    |.:::.|:|:|..|.::|:||||||||:|.|..|:|.....| .|.:.:||...::.:::
plant   512 N----KHLMRCVTGKLSPGRVSAVMGPSGAGKTTFLTALTGKAPGCIMTGMILVNGKVESIQSYK 572

  Fly   124 KLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILLTLSLSEHRYTMT----- 183
            |:..::.||:.:||||||:|.:..:...:|.....||||..:::.::.:|.|...|.::.     
plant   573 KIIGFVPQDDIVHGNLTVEENLWFSARCRLPADLPKPEKVLVVERVIESLGLQHVRDSLVGTVEK 637

  Fly   184 RNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSAR 248
            |.:||||:||:::.||:|..|.::..||||||||||:....:..|:..|..|..:...:||||..
plant   638 RGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVVHQPSYT 702

  Fly   249 LFEMFDQLYTLADGQCV-YQGSTKQLVPFLSTLNLECPSYHNPASYVIEVSCGEHGDHTRKLVDA 312
            ||.|||.|..||.|..: |||..|::..:.|:|.:..|...||..|.|::..|..          
plant   703 LFRMFDDLILLAKGGLICYQGPVKKVEEYFSSLGIVVPERVNPPDYYIDILEGIL---------- 757

  Fly   313 IDNGKRDVRSSADYAGLKARNDL-----VKVQNLKAILDKNDASSVSGRKYEDNLTLNNGLLNGM 372
                |....|...|..|..|..|     |.:..||:|  :..|||.||..     :.:.|..:|.
plant   758 ----KPSTSSGVTYKQLPVRWMLHNGYPVPMDMLKSI--EGMASSASGEN-----SAHGGSAHGS 811

  Fly   373 VNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITS---------PERYPTSQFHQF 428
            |  :..:|        |:..|:...||:.:|......|....:|         |..|  .|:..|
plant   812 V--VGDDG--------TSFAGEFWQDVKANVEIKKDNLQNNFSSSGDLSEREVPGVY--QQYRYF 864

  Fly   429 WVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLGFLFFNMLFLMYTSM 493
            ...|.:..|...|...:.||.|   ||.|..:|.|        |||....    |..:...||.:
plant   865 LGRLGKQRLREARTLAVDYLIL---LLAGICLGTL--------AKVSDET----FGAMGYTYTVI 914

  Fly   494 TITIL-------SFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIVYYFTSQP 551
            .:::|       ||.|:.....:|:.....|| :|:||....|.....:..::|:|:.|:|.:. 
plant   915 AVSLLCKITALRSFSLDKLHYWRESRAGMSSL-AYFLAKDTVDHFNTIVKPLVYLSMFYFFNNP- 977

  Fly   552 WELFRFSMFLSACLLISFVAQSVGLVVGAAMNVQNGVFLAPVMSVPFLLFSGFFVSFDAIPVYLR 616
                |.::..:..:||..|....|:....|:..:.|         |..|:|..      :||.|.
plant   978 ----RSTVTDNYVVLICLVYCVTGIAYTLAILFEPG---------PAQLWSVL------LPVVLT 1023

  Fly   617 W-------------ITYLSYIRYGFE 629
            .             |:.|.|.|:..|
plant  1024 LIATSTNDNKIVDSISELCYTRWALE 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 83/230 (36%)
3a01204 60..699 CDD:273361 170/611 (28%)
ABC2_membrane 431..630 CDD:279410 50/219 (23%)
ABCG28NP_200882.4 ABCG_EPDR 496..723 CDD:213180 83/230 (36%)
3a01204 513..1103 CDD:273361 169/606 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I1855
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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