DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG23

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_197442.2 Gene:ABCG23 / 832061 AraportID:AT5G19410 Length:633 Species:Arabidopsis thaliana


Alignment Length:673 Identity:175/673 - (26%)
Similarity:291/673 - (43%) Gaps:118/673 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LPKRPAVDLAFHNLTYRVKEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSG--- 100
            ||......|...||:|.:      |...||..||....|.::.|::||||.||||||.|:||   
plant    53 LPTPNRYSLTVTNLSYTI------NHTPILNSVSLAAESSKILAVVGPSGTGKSTLLKIISGRVN 111

  Fly   101 YKTSSIEGSVTMNGAE-RNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHS 164
            :|......:|.||..: .:.:..|:|..::.||:.|...|||:|.:..:....|....:| |:..
plant   112 HKALDPSSAVLMNNRKITDYNQLRRLCGFVPQDDDLLPLLTVKETLMYSAKFSLRDSTAK-EREE 175

  Fly   165 MIDDIL--LTLSLSEHRYT-----MTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCF 222
            .::.:|  |.|.|.:..:.     ..|.:|||::||:|||:|::.:|||:..|||||||||....
plant   176 RVESLLSDLGLVLVQDSFVGEGDEEDRGVSGGERKRVSIAVEMIRDPPILLLDEPTSGLDSRNSL 240

  Fly   223 QCIHLLKMLA-AGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPS 286
            |.:.||..:| :..|||:.:|||||.|:.:.......|:.|..::.||.:.|...::.|..:.|.
plant   241 QVVELLATMAKSKQRTVLFSIHQPSYRILDYISDYLILSRGSVIHLGSLEHLEDSIAKLGFQIPE 305

  Fly   287 YHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAILDKNDAS 351
            ..||..:.:|:                                        |::|:.....:.| 
plant   306 QLNPIEFAMEI----------------------------------------VESLRTFKPNSVA- 329

  Fly   352 SVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITS 416
                                    :|:    ||::...|...|.:|..:::..   .|...||: 
plant   330 ------------------------VVE----SSSMWPENNENDGIISKKEAFR---VLDVTEIS- 362

  Fly   417 PERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLGFL 481
               |..|:|.:          ..||...|...|....::.|..:|::|..:..|...|...||..
plant   363 ---YLCSRFCK----------IIYRTKQLFLARTMQAVVAGLGLGSVYTRLKRDEEGVAERLGLF 414

  Fly   482 FFNMLFLMYTSMTITILSFPL-EMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIVY 545
            .|::.||:  |.|:..|...| |..||:||:....|.:.||.:|.::|.:||..:..:::...||
plant   415 AFSLSFLL--SSTVEALPIYLRERRVLMKESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVY 477

  Fly   546 YFTSQPWELFRFSMFLSACLLISFVAQSVGLVVGAAMN--VQNGVFLAPVMSVPFLLFSGFFVSF 608
            :.......:..||.|:....||..:|.|:.|.:.|...  :.....:..|:.. |.||||:|:..
plant   478 WIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGA-FFLFSGYFIPK 541

  Fly   609 DAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCFQT---YCHFKSPITTLEELDMVNANFT 670
            :.||....::.|:|..||..|...:..|...||:  ||.:   .| ..:....|:|..:......
plant   542 EKIPKPWMFMYYVSLYRYPLESMVVNEYWSMREE--CFSSGNMGC-LMTGEDVLKERGLDKDTRW 603

  Fly   671 LDIVALIVIFVVLRISAY-LFLR 692
            :::..::..||..||..: :.||
plant   604 INVGIMLAFFVFYRILCWGILLR 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 81/235 (34%)
3a01204 60..699 CDD:273361 169/652 (26%)
ABC2_membrane 431..630 CDD:279410 54/201 (27%)
ABCG23NP_197442.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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