DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG6

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_196862.1 Gene:ABCG6 / 831202 AraportID:AT5G13580 Length:727 Species:Arabidopsis thaliana


Alignment Length:689 Identity:193/689 - (28%)
Similarity:306/689 - (44%) Gaps:122/689 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ENNNLLGTAGAGQLKAQIVPAQPKTLQ--HLPKRPAVDLA-----------FHNLTYRVKEGNR- 61
            |..|:.|.:.:....||::.....:.:  |......||||           |.:|||.||...: 
plant    19 EFGNVSGASSSPTTFAQLLQNVDDSTRRSHHQHHVDVDLASPDQSVPFVLSFTDLTYSVKVRRKF 83

  Fly    62 -------------------SNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSG-YKTSSI 106
                               |..||:|.|::|..|.||:.|::|.||:|||||::.|:. ....|:
plant    84 TWRRSVSSDPGAPSEGIFSSKTKTLLNGITGEARDGEILAVLGASGSGKSTLIDALANRIAKGSL 148

  Fly   107 EGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILL 171
            :|:||:||...|....:.:|||:|||:.|...|||:|.:..|...:|.:..||.:|...:..::.
plant   149 KGNVTLNGEVLNSKMQKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKSLRVQALID 213

  Fly   172 TLSLSEHRYTMT-----RNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKML 231
            .|.|.....|:.     |.:|||:::|:||.::::.:|.::|.|||||||||::....|.:||.:
plant   214 QLGLRNAANTVIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSALSVIKVLKRI 278

  Fly   232 AAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHNPASYVIE 296
            |..|..||.|:||||.||..:.|:|..|:.||.|:.||...|..|.:......|.:.|...:.::
plant   279 AQSGSMVIMTLHQPSYRLLRLLDRLLFLSRGQTVFSGSPAMLPRFFAEFGHPIPEHENRTEFALD 343

  Fly   297 VSCGEHGDHTRKLVDAIDNGKRDVRSSADY-AGLKARNDLVKVQNLKAILDKNDASSVSGRKYED 360
                        |:..::......||..:: .|.:.|              |.:..|.:|...::
plant   344 ------------LIRELEGSAGGTRSLVEFNKGFRQR--------------KAEPRSQTGLSLKE 382

  Fly   361 NLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERYPTSQF 425
            .::.:          |.|...||.|..||:..|.:.:..                    .||.. 
plant   383 AISAS----------ISKGKLVSGATTTTHSSGSSPVST--------------------IPTFA- 416

  Fly   426 HQFWVVL----KRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLGFLFFNML 486
            :.|||.|    ||::..|.|...|..:||.|.|:.||::..:::.:.|....|...||...|.|.
plant   417 NPFWVELAVLAKRSMTNSRRQPELFGIRLGAVLVTGFILATMFWQLDNSPKGVQERLGCFAFAMS 481

  Fly   487 FLMYTSMTITILSFPLEMPVLLKENF-------NRWYSLKSYYLAISVADLPFQAIFCVIYVSIV 544
            ...||...        .:||.|:|.|       ...|...||.|:.|:..||...|..:.:.:|.
plant   482 TTFYTCAD--------ALPVFLQERFIFMRETAYNAYRRSSYVLSHSLVALPSLIILSLAFAAIT 538

  Fly   545 YYFTSQPWELFRFSMFLSACLLISFVAQS--VGLVVGAAMNVQNGVFLAPVMSVPFLLFSGFFVS 607
            ::.......|..| :|....:|.||.|.|  |..:.|...:|..|..:...:...||||||||::
plant   539 FWGVGLDGGLMGF-LFYFLVILASFWAGSSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFIN 602

  Fly   608 FDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCF 646
            .|.||.|..|..|:|.::|.:|...|..:|   :..:||
plant   603 RDRIPGYWIWFHYISLVKYPYEAVLLNEFG---DPTKCF 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 93/260 (36%)
3a01204 60..699 CDD:273361 177/627 (28%)
ABC2_membrane 431..630 CDD:279410 62/211 (29%)
ABCG6NP_196862.1 3a01204 105..726 CDD:273361 176/603 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I1855
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.820

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