DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG17

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001319754.1 Gene:ABCG17 / 824676 AraportID:AT3G55100 Length:662 Species:Arabidopsis thaliana


Alignment Length:647 Identity:180/647 - (27%)
Similarity:297/647 - (45%) Gaps:127/647 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LPKRPAVDLAFHNLTYRVKEGNR---------SNAKTILKGVSGRLRSGELTAIMGPSGAGKSTL 94
            :|..|.| |||::|||.|....|         :..||:|.|::|..:.||:.||:|.||||||||
plant    15 IPPIPFV-LAFNDLTYNVTLQQRFGLRFGHSPAKIKTLLNGITGEAKEGEILAILGASGAGKSTL 78

  Fly    95 LNILSG-YKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFS 158
            ::.|:| ....|::|:||:||........|.:|||:||::.|...|||:|.:..|...:|.:..|
plant    79 IDALAGQIAEGSLKGTVTLNGEALQSRLLRVISAYVMQEDLLFPMLTVEETLMFAAEFRLPRSLS 143

  Fly   159 KPEKHSMIDDILLTLSLSEHRYTMT-----RNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDS 218
            |.:|.:.::.::..|.|:..:.|:.     |.:|||:::|:||..:::.:|.::|.|||||||||
plant   144 KSKKRNRVETLIDQLGLTTVKNTVIGDEGHRGVSGGERRRVSIGTDIIHDPIVLFLDEPTSGLDS 208

  Fly   219 STCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLE 283
            ::.|..:.:||.:|..|..||.:|||||.|:.|..|::..|:.||.|:..|...|..|.|.....
plant   209 TSAFMVVQVLKKIARSGSIVIMSIHQPSGRIMEFLDRVIVLSSGQIVFSDSPATLPLFFSEFGSP 273

  Fly   284 CPSYHNPASYVIEVSCGEHG--DHTRKLVDAIDNGK-RDVRSSADYAGLKARNDLVKVQNLKAIL 345
            .|...|.|.:.:::.....|  :.||.||:...|.: |.:|                        
plant   274 IPEKENIAEFTLDLIKDLEGSPEGTRGLVEFNRNWQHRKLR------------------------ 314

  Fly   346 DKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALL 410
                   ||...:.     |:..|...:|..:..|.    ||:|:.|     .:...||      
plant   315 -------VSQEPHH-----NSSSLGEAINASISRGK----LVSTSYR-----SIPSYVN------ 352

  Fly   411 TEEITSPERYPTSQFHQFWVVLKRTLLFSYR---DWT----LMYLRLFAHLLVGFLIGALYYDIG 468
                            .:||   .|::.:.|   :||    |:..|:|..::.|||:..:|:.:.
plant   353 ----------------PWWV---ETVILAKRYMINWTRTPELIGTRVFIVMMTGFLLATVYWKVD 398

  Fly   469 NDGAKVLSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQ 533
            :....|...|.|..|.|..:.| |....:.:|..|..:.|:|..:..|...||.::.|:..||..
plant   399 DSPRGVQERLSFFSFAMATMFY-SCADGLPAFIQERYIFLRETAHNAYRRSSYVISHSLVTLPHL 462

  Fly   534 AIFCVIYVSIVYYFTSQP--------WELFRFSMFLSACLLISFVAQSVGLVVGAAMNVQNGVFL 590
            ....:.:.:..::|....        :.:..|:.|.|.|..::||:   |::....|:..     
plant   463 FALSIGFAATTFWFVGLNGGLAGFIYYLMIIFASFWSGCSFVTFVS---GVIPNVMMSYM----- 519

  Fly   591 APVMSVPF------LLFSGFFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCF 646
                 |.|      ||||||:|:.|.|.:|..||.|:|.::|.:|......:.   :..|||
plant   520 -----VTFGYLSYCLLFSGFYVNRDRIHLYWIWIHYISLLKYPYEAVLHNEFD---DPSRCF 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 91/238 (38%)
3a01204 60..699 CDD:273361 170/626 (27%)
ABC2_membrane 431..630 CDD:279410 54/219 (25%)
ABCG17NP_001319754.1 3a01204 18..661 CDD:273361 179/644 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I1855
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.820

Return to query results.
Submit another query.