DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG20

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_190919.1 Gene:ABCG20 / 824519 AraportID:AT3G53510 Length:739 Species:Arabidopsis thaliana


Alignment Length:642 Identity:186/642 - (28%)
Similarity:282/642 - (43%) Gaps:105/642 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LPKRPAVDLAFHNLTYRVK----------------EGN--RSNAKTILKGVSGRLRSGELTAIMG 85
            :|......|:|.:|||.||                :||  ..|.|.:|.|:||..|.||:.|::|
plant    80 VPSSSPFVLSFKDLTYSVKIKKKFKPFPCCGNSPFDGNDMEMNTKVLLNGISGEAREGEMMAVLG 144

  Fly    86 PSGAGKSTLLNILSG-YKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVAT 149
            .||:|||||::.|:. ....|:.|.:|:||.....|..:.:|||:|||:.|...|||:|.:..:.
plant   145 ASGSGKSTLIDALANRISKESLRGDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSA 209

  Fly   150 NLKLSKKFSKPEKHSMIDDILLTLSLSEHRYTMT-----RNLSGGQKKRLSIALELVSNPPIMFF 209
            ..:|....||.:|.:.:..::..|.|.....|:.     |.:|||:::|:||..:::.:|.|:|.
plant   210 EFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFL 274

  Fly   210 DEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLV 274
            |||||||||::.:..:.:|:.:|..|..||.:|||||.|:..:.|:|..|:.|..||.||...|.
plant   275 DEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDKLIFLSRGNTVYSGSPTHLP 339

  Fly   275 PFLSTLNLECPSYHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQ 339
            .|.|......|...|...:.:        |..|:|.|:.:             |.|:..:..|..
plant   340 QFFSEFGHPIPENENKPEFAL--------DLIRELEDSPE-------------GTKSLVEFHKQW 383

  Fly   340 NLKAILDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVN 404
            ..|      ..||.|.|.       .|..|...::..:..|.:.|.  .||.|..          
plant   384 RAK------QTSSQSRRN-------TNVSLKDAISASISRGKLVSG--ATNLRSS---------- 423

  Fly   405 CTTALLTEEITSPERYPTSQFHQFW----VVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYY 465
                  .:...:|          ||    |:.||::|.|.|...|..:||.|.|:.|.::..:::
plant   424 ------FQTFANP----------FWTEMLVIGKRSILNSRRQPELFGIRLGAVLVTGMILATIFW 472

  Fly   466 DIGNDGAKVLSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADL 530
            .:.|....:...|||..|.|....||... .|..|..|..:.::|.....|...||.||.::..:
plant   473 KLDNSPRGIQERLGFFAFAMSTTFYTCAE-AIPVFLQERYIFMRETAYNAYRRSSYVLAHTIISI 536

  Fly   531 P----FQAIFCVIYVSIVYYFTSQPWELFRFSMFLSACLLISFVAQS--VGLVVGAAMNVQNGVF 589
            |    ..|.|.....|.|.........||.|...|:|     |.|.|  |..:.|...:|..|..
plant   537 PALIILSAAFAASTFSAVGLAGGSEGFLFFFFTILTA-----FWAGSSFVTFLSGVVSHVMIGFT 596

  Fly   590 LAPVMSVPFLLFSGFFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCF 646
            :...:...||||||||:|.|.||:|..|..|||.::|.:||.....:   .:..:||
plant   597 VVVAILAYFLLFSGFFISRDRIPLYWIWFHYLSLVKYPYEGVLQNEF---EDPTKCF 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 88/247 (36%)
3a01204 60..699 CDD:273361 177/605 (29%)
ABC2_membrane 431..630 CDD:279410 63/204 (31%)
ABCG20NP_190919.1 P-loop_NTPase 119..333 CDD:304359 79/213 (37%)
3a01204 120..738 CDD:273361 176/602 (29%)
ABC2_membrane 438..641 CDD:279410 65/208 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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