DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG38

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001319673.1 Gene:ABCG38 / 822863 AraportID:AT3G30842 Length:1418 Species:Arabidopsis thaliana


Alignment Length:682 Identity:174/682 - (25%)
Similarity:293/682 - (42%) Gaps:117/682 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LPKRPAVDLAFHNLTYRV-------KEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLN 96
            :|.:| :.:.|.|:||.|       ::|.|.|...:|.|:||..|.|.|||:||.|||||:||::
plant   814 IPFKP-LYMTFENITYSVDTPKEMKEKGIRENKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMD 877

  Fly    97 ILSGYK-TSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKP 160
            :|:|.| |..|:|.:.::|..:...:|.::|.|..|.:.....|||.|::..:..|:|.......
plant   878 VLAGRKNTGYIQGEIYVSGFPKKQDSFARVSGYCEQSDIHSPLLTVYESLLYSAWLRLPPDIDTH 942

  Fly   161 EKHSMIDDILLTLSLSEHR-----YTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSST 220
            .:...|::::..:.|...|     |.....||..|:||::||:|||:||.|:|.||||||||:..
plant   943 TRELFIEEVMELIELKALREMLVGYVGISGLSTEQRKRMTIAVELVANPSILFMDEPTSGLDARA 1007

  Fly   221 CFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLA-DGQCVYQG----STKQLVPFLSTL 280
            ....:..::.....||||:|||||||..:||.||:|:.|. .|:.:|.|    .:.||:.:...:
plant  1008 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLLTRGGEEIYVGPIGHHSSQLIEYFEGI 1072

  Fly   281 N--LECPSYHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKA 343
            .  .:....:|||::.:||:                     .|:..|..|:... .:.|..||  
plant  1073 RGVGKIKEGYNPATWALEVT---------------------TRAQEDVLGVTFA-QVYKKSNL-- 1113

  Fly   344 ILDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKE-GNVSSALVTTNERGDAMIDVEKSVNCTT 407
                          |..|            .|::|| .|:...                      
plant  1114 --------------YRRN------------KDLIKELNNIPPH---------------------- 1130

  Fly   408 ALLTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIG-NDG 471
               .::|....:|..|...||...|.:.....:|:.....:|......||.:.|.:::.:| ..|
plant  1131 ---AQDIHFSTKYSQSYLSQFQACLWKQHKSYWRNVPYNAVRFSFGAAVGIMYGIIFWSLGKRKG 1192

  Fly   472 AK--VLSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQA 534
            .:  :.:::|.:...:.||...|..........|..|..:|.....||...|..:..:.::|:..
plant  1193 TRQDIFNSVGAMSTVVGFLSSQSAATVRPVVIAERTVFYREAGAGMYSALPYAFSQVIIEIPYTM 1257

  Fly   535 IFCVIYVSIVYYFTSQPWELFRF--SMFLSACLLISFVAQSVGLVVGAAMNVQNGVFLAPVMSVP 597
            ....||..|||......|...:|  ::|.:...::..:...: :|:..:.|.:....|..|:|..
plant  1258 AQACIYGVIVYGMIGYEWTASKFFLNIFFTFISILYSIYTGI-MVISVSPNQEIASILNGVISTS 1321

  Fly   598 FLLFSGFFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHFKSPITTLEEL 662
            :.:||||.:....:.|:|||.||:....:|..|..:|.||....:|...:|...|.......|  
plant  1322 WNVFSGFTIPRPRMHVWLRWFTYVCPGWWGLYGLTIAQYGDVETRLDTGETVVEFMKNYYGYE-- 1384

  Fly   663 DMVNANF----TLDIVALIVIFVVLRISAYLF 690
                .||    :|.::|..:.||.:    |.|
plant  1385 ----YNFLWVVSLTLIAFSMFFVFI----YAF 1408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 88/237 (37%)
3a01204 60..699 CDD:273361 166/654 (25%)
ABC2_membrane 431..630 CDD:279410 43/203 (21%)
ABCG38NP_001319673.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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