DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG3164 and ABCG1

DIOPT Version :9

Sequence 1:	NP_722605.1	Gene:	CG3164 / 33171	FlyBaseID:	FBgn0025683	Length:	699	Species:	Drosophila melanogaster
Sequence 2:	NP_181467.1	Gene:	ABCG1 / 818520	AraportID:	AT2G39350	Length:	740	Species:	Arabidopsis thaliana

Alignment Length:	639	Identity:	173/639 - (27%)
Similarity:	284/639 - (44%)	Gaps:	93/639 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    47 LAFHNLTYRVK----------------------EGNRSNAKTILKGVSGRLRSGELTAIMGPSGA 89
            |:|.||||.|.                      :..|...||:|..:||..|.||:.|::|.||:
plant    67 LSFDNLTYNVSVRPKLDFRNLFPRRRTEDPEIAQTARPKTKTLLNNISGETRDGEIMAVLGASGS 131

  Fly    90 GKSTLLNILSG-YKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKL 153
            |||||::.|:. ....|::|:|.:||........:.:|||:|||:.|...|||:|.:..|...:|
plant   132 GKSTLIDALANRIAKGSLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRL 196

  Fly   154 SKKFSKPEKHSMIDDILLTLSLSEHRYTMT-----RNLSGGQKKRLSIALELVSNPPIMFFDEPT 213
            .:...|.:|...:..::..|.:.....|:.     |.:|||:::|:||.::::.:|.::|.||||
plant   197 PRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPT 261

  Fly   214 SGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLS 278
            |||||::.|..:.:||.:|..|..||.:|||||.|:..:.|:|..|:.|..||.||...|..|.:
plant   262 SGLDSTSAFMVVKVLKRIAQSGSIVIMSIHQPSHRVLGLLDRLIFLSRGHTVYSGSPASLPRFFT 326

  Fly   279 TLNLECPSYHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSA-DYAGLKARNDLVKVQNLK 342
            ......|...|...:.:::.                   |::..|| ...||...|.  |.|.:|
plant   327 EFGSPIPENENRTEFALDLI-------------------RELEGSAGGTRGLIEFNK--KWQEMK 370

  Fly   343 AILDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEG--NVSSALVTTNERGDAMIDVEKSVNC 405
            ...::....:.....| .||||...:...:....:..|  :|:....|||
plant   371 KQSNRQPPLTPPSSPY-PNLTLKEAIAASISRGKLVSGGESVAHGGATTN--------------- 419

  Fly   406 TTALLTEEITSPERYPTSQFHQFWVVL----KRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYD 466
            ||.|......:|          .|:.:    ||::|.|.|...|..:|:.:.::.||::..:::.
plant   420 TTTLAVPAFANP----------MWIEIKTLSKRSMLNSRRQPELFGIRIASVVITGFILATVFWR 474

  Fly   467 IGNDGAKVLSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLP 531
            :.|....|...|||..|.|..:.||... .:..|..|..:.::|.....|...||.|:.::...|
plant   475 LDNSPKGVQERLGFFAFAMSTMFYTCAD-ALPVFLQERYIFMRETAYNAYRRSSYVLSHAIVSFP 538

  Fly   532 FQAIFCVIYVSIVYYFTSQPWELFRFSMFLSACLLI--SFVAQS--VGLVVGAAMNVQNGVFLAP 592
            ......|.:.:..|:.......|   :..|..||:|  ||.:.|  |..:.|...:|..|..:..
plant   539 SLIFLSVAFAATTYWAVGLDGGL---TGLLFYCLIILASFWSGSSFVTFLSGVVPSVMLGYTIVV 600

  Fly   593 VMSVPFLLFSGFFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCF 646
            .:...||||||||::.:.||.|..|..|:|.::|.:|......:.   :..:||
plant   601 AILAYFLLFSGFFINRNRIPDYWIWFHYMSLVKYPYEAVLQNEFS---DATKCF 651

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG3164	NP_722605.1	ABCG_EPDR	44..268	CDD:213180	85/248 (34%)
		3a01204	60..699	CDD:273361	166/604 (27%)
		ABC2_membrane	431..630	CDD:279410	55/206 (27%)
ABCG1	NP_181467.1	3a01204	106..739	CDD:273361	165/600 (28%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0061
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1022017at2759
OrthoFinder	1	1.000	-	-		FOG0000053
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100076
Panther	1	1.100	-	-	O	PTHR48041
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.820