DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG2

DIOPT Version :10

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0288229 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_181272.1 Gene:ABCG2 / 818312 AraportID:AT2G37360 Length:755 Species:Arabidopsis thaliana


Alignment Length:639 Identity:189/639 - (29%)
Similarity:286/639 - (44%) Gaps:109/639 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LAFHNLTYRVK-------------EGNRS--NAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLN 96
            |:|.:|||.||             .||.|  |.|.:|.|:||..|.||:.|::|.||:|||||::
plant    98 LSFTDLTYSVKIQKKFNPLACCRRSGNDSSVNTKILLNGISGEAREGEMMAVLGASGSGKSTLID 162

  Fly    97 ILSG-YKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKP 160
            .|:. ....|:.||:|:||.....|..:.:|||:|||:.|...|||:|.:..:...:|.:..||.
plant   163 ALANRIAKDSLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKK 227

  Fly   161 EKHSMIDDILLTLSLSEHRYTMT-----RNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSST 220
            :|.:.:..::..|.|.....|:.     |.:|||:::|:||..:::.:|.|:|.|||||||||::
plant   228 KKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTS 292

  Fly   221 CFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECP 285
            .:..|.:|:.:|..|..||.:|||||.|:..:.|||..|:.|..||.||...|..|.|......|
plant   293 AYMVIKVLQRIAQSGSIVIMSIHQPSYRIMGLLDQLIFLSKGNTVYSGSPTHLPQFFSEFKHPIP 357

  Fly   286 SYHNPASYVI----EVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAILD 346
            ...|...:.:    |:.....|  |:.||:.....:  .:.:..|.....||  ..|.:||..: 
plant   358 ENENKTEFALDLIRELEYSTEG--TKPLVEFHKQWR--AKQAPSYNNNNKRN--TNVSSLKEAI- 415

  Fly   347 KNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLT 411
               .:|:|..|.....|.||                                   |.|.|.:..|
plant   416 ---TASISRGKLVSGATNNN-----------------------------------SSNLTPSFQT 442

  Fly   412 EEITSPERYPTSQFHQFW----VVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGA 472
              ..:|          ||    |:.||.:|.|.|...|:.:||.|.::.|.::..::.::.|...
plant   443 --FANP----------FWIEMIVIGKRAILNSRRQPELLGMRLGAVMVTGIILATMFTNLDNSPK 495

  Fly   473 KVLSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFC 537
            .....|||..|.|....||... .|..|..|..:.::|.....|...||.|:.|:..:|...:..
plant   496 GAQERLGFFAFAMSTTFYTCAE-AIPVFLQERYIFMRETAYNAYRRSSYVLSQSIISIPALIVLS 559

  Fly   538 VIYVSIVYYFTSQPWEL--------FRFSMFLSACLLISFVAQS--VGLVVGAAMNVQNGVFLAP 592
            ..:.:..:      |.:        |.|..|   .:|.||.|.|  |..:.|...||..|..:..
plant   560 ASFAATTF------WAVGLDGGANGFFFFYF---TILASFWAGSSFVTFLSGVIPNVMLGFTVVV 615

  Fly   593 VMSVPFLLFSGFFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCF 646
            .:...||||||||:|.|.||||..|..|:|.::|.:||.....:   :...|||
plant   616 AILAYFLLFSGFFISRDRIPVYWLWFHYISLVKYPYEGVLQNEF---QNPTRCF 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 3a01204 60..699 CDD:273361 181/613 (30%)
ABCG2NP_181272.1 3a01204 95..754 CDD:273361 189/639 (30%)

Return to query results.
Submit another query.