DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG34

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_181179.2 Gene:ABCG34 / 818211 AraportID:AT2G36380 Length:1453 Species:Arabidopsis thaliana


Alignment Length:729 Identity:176/729 - (24%)
Similarity:311/729 - (42%) Gaps:173/729 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLGTAGAGQLKAQIVPAQPKTLQHLPKRPAVDLAFHNLTYRVK----------EGNRSNAKTILK 69
            |..|:..|..|..::|.||           :.|||:|:.|.|.          ||:|..   :|:
plant   831 LTSTSSHGPKKGMVLPFQP-----------LSLAFNNVNYYVDMPAEMKAQGVEGDRLQ---LLR 881

  Fly    70 GVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKTSS-IEGSVTMNGAERNLSAFRKLSAYIMQDN 133
            .|.|..|.|.|||::|.|||||:||:::|:|.||.. :|||:.::|..:|.:.|.::|.|..| |
plant   882 DVGGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYVEGSINISGYPKNQATFARVSGYCEQ-N 945

  Fly   134 QLHG-NLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILLTLSLSEHRYTM-----TRNLSGGQKK 192
            .:|. ::||.|::..:..|:||.......:...:::::..:.|...|.::     ...||..|:|
plant   946 DIHSPHVTVYESLIYSAWLRLSADIDTKTREMFVEEVMELVELKPLRNSIVGLPGVDGLSTEQRK 1010

  Fly   193 RLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLY 257
            ||:||:|||:||.|:|.||||||||:......:..::.....||||:|||||||..:||.||:|.
plant  1011 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELL 1075

  Fly   258 TL-ADGQCVYQGS----TKQLVPFLSTLN--LECPSYHNPASYVIEVSCGEHGDHTRKLVDAIDN 315
            .: ..||.:|.|:    :::||.:...:.  .:....:|||:::::|:                .
plant  1076 LMKRGGQVIYAGTLGHHSQKLVEYFEAIEGVPKIKDGYNPATWMLDVT----------------T 1124

  Fly   316 GKRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEG 380
            ...:.:.|.|:                                                      
plant  1125 PSMESQMSVDF------------------------------------------------------ 1135

  Fly   381 NVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSP-----ERYPTSQFHQ---------FWVV 431
                          |.|.|..|||.....|.:|:::|     :.|..:::.|         ||.:
plant  1136 --------------AQIFVNSSVNRRNQELIKELSTPPPGSNDLYFRTKYAQPFSTQTKACFWKM 1186

  Fly   432 LKRTLLFSYRDWTL-MY--LRLFAHLLVGFLIGALYYDIGN--DGAKVLSN-LGFLFFNMLFLMY 490
            .       :.:|.. .|  :|....:::|.|.|.|::..|.  :..:.|:| .|.::..:|||..
plant  1187 Y-------WSNWRYPQYNAIRFLMTVVIGVLFGLLFWQTGTKIEKEQDLNNFFGAMYAAVLFLGA 1244

  Fly   491 TSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIVYYFTSQPW--- 552
            |:......:..:|..|..:|.....||...|.::....::.:..|...:|..|:|......|   
plant  1245 TNAATVQPAVAIERTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGYDWTVV 1309

  Fly   553 ELFRFSMFLSACLLISFVAQSVGLVVGAAMNVQ-NGVFLAPVMSVPFLLFSGFFVSFDAIPVYLR 616
            :.|.|..::..| .:.|....: ::|....|.| .|:.|:..:|. :.|||||.:....||::.|
plant  1310 KFFWFYYYMLTC-FVYFTLYGM-MLVALTPNYQIAGICLSFFLSF-WNLFSGFLIPRPQIPIWWR 1371

  Fly   617 WITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHFKSPITTLEELDMVNA-----NFTLDIVAL 676
            |..:.|.:.:...|...:..| .|:.:      .|    ||.:.::.:...     .|..|.:.:
plant  1372 WYYWASPVAWTLYGIITSQVG-DRDSI------VH----ITGVGDMSLKTLLKNGFGFDYDFLPV 1425

  Fly   677 IVIFVVLRISAYLF 690
            :.:..:..|..:||
plant  1426 VAVVHIAWILIFLF 1439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 90/241 (37%)
3a01204 60..699 CDD:273361 161/674 (24%)
ABC2_membrane 431..630 CDD:279410 46/208 (22%)
ABCG34NP_181179.2 PLN03140 11..1453 CDD:215599 176/729 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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