DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and ABCG5

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_178984.1 Gene:ABCG5 / 815846 AraportID:AT2G13610 Length:649 Species:Arabidopsis thaliana


Alignment Length:681 Identity:189/681 - (27%)
Similarity:308/681 - (45%) Gaps:109/681 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RPAVDLAF----HNLTYRVKEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYK 102
            ||..|...    .:|....:.||:  .|.:||||:.|.:..|:.||:||||||||:||.||:. :
plant    35 RPEADQPVKTEEESLKLEDETGNK--VKHVLKGVTCRAKPWEILAIVGPSGAGKSSLLEILAA-R 96

  Fly   103 TSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMID 167
            .....|||.:|....:.:.|:|:|.|:.|.:.|...|||:|.:..:..|:|  |....|..|.:.
plant    97 LIPQTGSVYVNKRPVDRANFKKISGYVTQKDTLFPLLTVEETLLFSAKLRL--KLPADELRSRVK 159

  Fly   168 DILLTLSLSEHRYT-----MTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHL 227
            .::..|.|......     ..|.:|||:::|:||.:|::.:|.::..|||||||||::....|.:
plant   160 SLVHELGLEAVATARVGDDSVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALLIIDM 224

  Fly   228 LKMLA-AGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHNPA 291
            ||.:| ..|||:|.|||||..|:.:.|:.:..||:|..:.|||..||..:|.:..|..|.:.|..
plant   225 LKHMAETRGRTIILTIHQPGFRIVKQFNSVLLLANGSTLKQGSVDQLGVYLRSNGLHPPLHENIV 289

  Fly   292 SYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVSGR 356
            .:.||            .:::|...:|          |:.......|...:..|.:..:....|.
plant   290 EFAIE------------SIESITKQQR----------LQESRRAAHVLTPQTTLQEKRSEDSQGE 332

  Fly   357 KYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERYP 421
            ......||........|.|:   |.::.|...|.:..::.::       .|.:||          
plant   333 SKSGKFTLQQLFQQTRVADV---GTMNIATEFTRDFANSRLE-------ETMILT---------- 377

  Fly   422 TSQFHQFWVVLKRTL-LFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLGFLFFNM 485
                |:|...:.||. ||:.|  |:..|.      .|.::|.:::::.:|.......:|...|.:
plant   378 ----HRFSKNIFRTKELFACR--TVQMLG------SGIVLGLIFHNLKDDLKGARERVGLFAFIL 430

  Fly   486 LFLMYTSMTITILSFPL---EMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIVYYF 547
            .||    :|.||.:.|:   |..:|:||..:..|.:.||.:|..:..|||..|..:::.:.||:.
plant   431 TFL----LTSTIEALPIFLQEREILMKETSSGSYRVSSYAVANGLVYLPFLLILAILFSTPVYWL 491

  Fly   548 TSQPWELFRFSMFLSACLLISFVAQSVGLVVGAAMN---VQNGVFLAPVMSVPFLLFSGFFVSFD 609
            .........|..|.....||.:.|.||.:...|.:.   |.|.| ::.||. .|.||||:|:|..
plant   492 VGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSV-ISGVMG-SFFLFSGYFISNH 554

  Fly   610 AIPVYLRWITYLSYIRYGFEGTAL---------ATYGYGREKLRCFQTYCHFKSPITTLEEL--- 662
            .||.|..::.|:|..:|.|||..:         ..||:|:         |     :.|.|:|   
plant   555 EIPGYWIFMHYISLFKYPFEGFLINEFSKSNKCLEYGFGK---------C-----LVTEEDLLKE 605

  Fly   663 DMVNANFTLDIVALIVIFVVL-RISAYLFLR 692
            :..........|.:::.||:| |..:|:.||
plant   606 ERYGEESRWRNVVIMLCFVLLYRFISYVILR 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 82/233 (35%)
3a01204 60..699 CDD:273361 184/659 (28%)
ABC2_membrane 431..630 CDD:279410 59/205 (29%)
ABCG5NP_178984.1 3a01204 37..638 CDD:273361 187/679 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.