DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and abcg4b

DIOPT Version :10

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0288229 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001104682.1 Gene:abcg4b / 794238 ZFINID:ZDB-GENE-080215-10 Length:644 Species:Danio rerio


Alignment Length:681 Identity:303/681 - (44%)
Similarity:424/681 - (62%) Gaps:77/681 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QLKAQIVPAQPKTLQHLPKRPAVDLAFHNLTYRVKEG---NRSNAKTILKGVSGRLRSGELTAIM 84
            :::..|..||  ...|||||..|:|.|..|.|.::||   .:...|.:||.:||:..|.||..||
Zfish    37 KVENHITEAQ--RFSHLPKRTTVELEFKELCYTIREGPWWKKQGYKALLKCLSGKFSSRELIGIM 99

  Fly    85 GPSGAGKSTLLNILSGYKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVAT 149
            ||||||||||:|||:||:.:.:.|.:.:||..|:...|||:|.||||:::|..:|:|||||.|:.
Zfish   100 GPSGAGKSTLMNILAGYRETGMTGQILVNGKLRDPRTFRKMSCYIMQEDKLLPHLSVQEAMMVSA 164

  Fly   150 NLKLSKKFSKPEKHSMIDDILLTLSLSEHRYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTS 214
            ||||::  |...|..:|.:||..|.|.|..:|.|.:|||||.|||:||||||:|||:||||||||
Zfish   165 NLKLNE--SSEVKKELIKEILTALGLHECVHTRTVSLSGGQCKRLAIALELVNNPPVMFFDEPTS 227

  Fly   215 GLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLST 279
            ||||::|||.:.|:|.||.||||:|||||||||:||||||:||.|:.|||:|:||...|:|:|..
Zfish   228 GLDSASCFQVVSLMKSLAQGGRTIICTIHQPSAKLFEMFDKLYILSQGQCIYKGSVPYLIPYLRG 292

  Fly   280 LNLECPSYHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAI 344
            |.|.||:|||||.::|||:.||:||....|.:|:..|                  :..::.....
Zfish   293 LGLHCPTYHNPADFIIEVASGEYGDLNPVLFEAVQGG------------------MCALEEKCNC 339

  Fly   345 LDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTAL 409
            :||...:|.:.:..:|                  .|:|.|                         
Zfish   340 IDKTTVTSCAAKCVKD------------------PGHVES------------------------- 361

  Fly   410 LTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKV 474
                    ..:.||...||.::.|||.:...||..|.:|||.:|:.:|.|||.||.:||||.:||
Zfish   362 --------HTFATSSLTQFCILFKRTFITICRDQVLTHLRLMSHISIGVLIGLLYLNIGNDASKV 418

  Fly   475 LSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVI 539
            .:|.|||||:|||||:.::..|:|:|||||.|.|:|:.|.|||||:||||.::||:|||.:..::
Zfish   419 FNNTGFLFFSMLFLMFGALMPTVLTFPLEMAVFLREHLNYWYSLKAYYLAKTMADIPFQVLCPIM 483

  Fly   540 YVSIVYYFTSQPWELFRFSMFLSACLLISFVAQSVGLVVGAA-MNVQNGVFLAPVMSVPFLLFSG 603
            |.||||:.|.||.|..|:.:||:..:..:.||||:||:|||| .::|...|:.||..:|.|||||
Zfish   484 YCSIVYWMTEQPPEASRYLLFLALSICTALVAQSLGLLVGAASTSLQVATFVGPVTGIPVLLFSG 548

  Fly   604 FFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHFKSPITTLEELDMVNAN 668
            |||:||.||.||:|.:|:||:|||||...|:.||..|.:..|....|.|:.|...|:.||:.:|.
Zfish   549 FFVNFDTIPEYLQWSSYVSYVRYGFEEVILSIYGMNRTERECPGRVCKFQRPEEVLQLLDVEDAK 613

  Fly   669 FTLDIVALIVIFVVLRISAYLFLRWKLKTVR 699
            ..:|.:.|.:.||:||::.|:.||:|:|:.|
Zfish   614 LYMDFIVLGIFFVILRLATYVVLRYKIKSER 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 3a01204 60..699 CDD:273361 287/639 (45%)
abcg4bNP_001104682.1 3a01204 42..644 CDD:273361 302/674 (45%)

Return to query results.
Submit another query.