DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and abcg4b

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001104682.1 Gene:abcg4b / 794238 ZFINID:ZDB-GENE-080215-10 Length:644 Species:Danio rerio


Alignment Length:681 Identity:303/681 - (44%)
Similarity:424/681 - (62%) Gaps:77/681 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QLKAQIVPAQPKTLQHLPKRPAVDLAFHNLTYRVKEG---NRSNAKTILKGVSGRLRSGELTAIM 84
            :::..|..||  ...|||||..|:|.|..|.|.::||   .:...|.:||.:||:..|.||..||
Zfish    37 KVENHITEAQ--RFSHLPKRTTVELEFKELCYTIREGPWWKKQGYKALLKCLSGKFSSRELIGIM 99

  Fly    85 GPSGAGKSTLLNILSGYKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVAT 149
            ||||||||||:|||:||:.:.:.|.:.:||..|:...|||:|.||||:::|..:|:|||||.|:.
Zfish   100 GPSGAGKSTLMNILAGYRETGMTGQILVNGKLRDPRTFRKMSCYIMQEDKLLPHLSVQEAMMVSA 164

  Fly   150 NLKLSKKFSKPEKHSMIDDILLTLSLSEHRYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTS 214
            ||||::  |...|..:|.:||..|.|.|..:|.|.:|||||.|||:||||||:|||:||||||||
Zfish   165 NLKLNE--SSEVKKELIKEILTALGLHECVHTRTVSLSGGQCKRLAIALELVNNPPVMFFDEPTS 227

  Fly   215 GLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLST 279
            ||||::|||.:.|:|.||.||||:|||||||||:||||||:||.|:.|||:|:||...|:|:|..
Zfish   228 GLDSASCFQVVSLMKSLAQGGRTIICTIHQPSAKLFEMFDKLYILSQGQCIYKGSVPYLIPYLRG 292

  Fly   280 LNLECPSYHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAI 344
            |.|.||:|||||.::|||:.||:||....|.:|:..|                  :..::.....
Zfish   293 LGLHCPTYHNPADFIIEVASGEYGDLNPVLFEAVQGG------------------MCALEEKCNC 339

  Fly   345 LDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTAL 409
            :||...:|.:.:..:|                  .|:|.|                         
Zfish   340 IDKTTVTSCAAKCVKD------------------PGHVES------------------------- 361

  Fly   410 LTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKV 474
                    ..:.||...||.::.|||.:...||..|.:|||.:|:.:|.|||.||.:||||.:||
Zfish   362 --------HTFATSSLTQFCILFKRTFITICRDQVLTHLRLMSHISIGVLIGLLYLNIGNDASKV 418

  Fly   475 LSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVI 539
            .:|.|||||:|||||:.::..|:|:|||||.|.|:|:.|.|||||:||||.::||:|||.:..::
Zfish   419 FNNTGFLFFSMLFLMFGALMPTVLTFPLEMAVFLREHLNYWYSLKAYYLAKTMADIPFQVLCPIM 483

  Fly   540 YVSIVYYFTSQPWELFRFSMFLSACLLISFVAQSVGLVVGAA-MNVQNGVFLAPVMSVPFLLFSG 603
            |.||||:.|.||.|..|:.:||:..:..:.||||:||:|||| .::|...|:.||..:|.|||||
Zfish   484 YCSIVYWMTEQPPEASRYLLFLALSICTALVAQSLGLLVGAASTSLQVATFVGPVTGIPVLLFSG 548

  Fly   604 FFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHFKSPITTLEELDMVNAN 668
            |||:||.||.||:|.:|:||:|||||...|:.||..|.:..|....|.|:.|...|:.||:.:|.
Zfish   549 FFVNFDTIPEYLQWSSYVSYVRYGFEEVILSIYGMNRTERECPGRVCKFQRPEEVLQLLDVEDAK 613

  Fly   669 FTLDIVALIVIFVVLRISAYLFLRWKLKTVR 699
            ..:|.:.|.:.||:||::.|:.||:|:|:.|
Zfish   614 LYMDFIVLGIFFVILRLATYVVLRYKIKSER 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 128/226 (57%)
3a01204 60..699 CDD:273361 287/639 (45%)
ABC2_membrane 431..630 CDD:279410 107/199 (54%)
abcg4bNP_001104682.1 3a01204 42..644 CDD:273361 302/674 (45%)
ABCG_EPDR 57..281 CDD:213180 128/225 (57%)
ABC2_membrane 375..574 CDD:279410 106/198 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11201
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177791at33208
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm25175
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.810

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