DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and Abca14

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_017167760.1 Gene:Abca14 / 67928 MGIID:2388708 Length:1719 Species:Mus musculus


Alignment Length:723 Identity:149/723 - (20%)
Similarity:273/723 - (37%) Gaps:212/723 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WKQFLENNNLLGTAGAGQLKAQI--------VPAQPKTL------QHLPKRPAVDLAFHNLTYRV 56
            |..||:.....|.....:.::|:        :..:|..|      |||.|    :....|.|...
Mouse   514 WNFFLQKAYWFGEPALSREESQVSDLLSSDFMEPEPVGLVAGIRIQHLYK----EFILKNSTLMA 574

  Fly    57 KEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKTSSIEGSVTMNGAE--RNL 119
                       :..:|..|..|::|.::|.:||||:|.|:||:|....: .|.|.::|.:  .::
Mouse   575 -----------VNDLSLNLYEGQITVLLGHNGAGKTTTLSILTGLYLPT-RGKVYISGYDISSDM 627

  Fly   120 SAFRKLSAYIMQDNQLHGNLTVQEAM---TVATNLKLSKKFSKPEKHSMIDDILLTLSLSEHRYT 181
            ...||......||:.|...|||.|.:   .|...:.|..:..:..:      :|.:..|.:...|
Mouse   628 VQIRKSLGLCPQDDLLFPMLTVSEHLHFYCVIKGIPLQNQSRETNR------MLTSFGLLQQSNT 686

  Fly   182 MTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPS 246
            |:::||||.|::|||.:.|:.:..::..||||||:|..:......||:........::.|.|...
Mouse   687 MSKDLSGGMKRKLSIIIALIGDTKVVILDEPTSGMDPVSRRATWDLLQHYKKDRTILLTTHHMDE 751

  Fly   247 ARLFEMFDQLYTLADGQCVYQGSTK--------------------------QLVP-FLSTLNLEC 284
            |.:  :.|::..|..|.....||:.                          ||:. ::.|..:|.
Mouse   752 ADV--LGDRIAILVMGILKCCGSSLFLKKLYGVGYHLVIVKTPDSNDEKIFQLIKNYIPTAKMET 814

  Fly   285 PSYHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDL-VKVQNLKAILDKN 348
                |.|:.:..:...||.....:|...::..:.::..|.....:...::: .||.||:.:....
Mouse   815 ----NVAAELSFILPKEHTHRFAELFTDLEEKQEELGISGFGVSMTTMDEVFFKVSNLEDLKLNT 875

  Fly   349 D----ASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTN-ER-GDAMIDVEKSVNCTT 407
            :    ||.||....|||..:|                     |..| || |.:...::.|.|...
Mouse   876 EIAPSASIVSQSSNEDNQNMN---------------------VPRNFERPGYSRRHLDSSFNAGW 919

  Fly   408 ALLTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHL-LVGFLIGALYYDIGNDG 471
            :|..:              ||..:..:.::||:|.|.|:.|:|.|.| |:..||..:.:.:..:.
Mouse   920 SLYIQ--------------QFRAMFIKRVMFSWRYWKLLLLQLLALLGLMYLLIKGISFSVPKEP 970

  Fly   472 AKVLS-----------------NLGFLFFNML--------------------FLMYTSMTI--TI 497
            |:|:.                 ||..:....|                    :|:.:...|  .|
Mouse   971 ARVMDLEQYGETIVPFSVSGDPNLTQILTKNLETMLKAKKQKIHEVQGDMKNYLLTSKDCIYSCI 1035

  Fly   498 LSFPLEMPVLLKENFNRWYSLKSYY---LAISVADLPFQAIFCVIYVSIVYYFTS---------- 549
            ::|.|:: ...::.|..|::.::|:   |::|:.|            :|:|.:.|          
Mouse  1036 VAFSLDV-TTEEKTFIFWFNNEAYHAAPLSLSILD------------NIIYKYLSGPDATITVSN 1087

  Fly   550 --QPWE--------------------LFRFSMFLSACLLISFVAQSVGLVVGAAMNVQNGVFLAP 592
              ||..                    ||..|:|.|...|::...:     |..|.::|   |::.
Mouse  1088 NPQPQRVTKDKSNERSISGIQIVFNLLFGMSIFTSGFCLMTVTER-----VSKAKHIQ---FVSG 1144

  Fly   593 VMSVPFLL 600
            |.::.|.|
Mouse  1145 VYTLNFWL 1152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 58/228 (25%)
3a01204 60..699 CDD:273361 136/655 (21%)
ABC2_membrane 431..630 CDD:279410 46/245 (19%)
Abca14XP_017167760.1 rim_protein <128..1709 CDD:130324 149/723 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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