DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and Abcg8

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_080456.1 Gene:Abcg8 / 67470 MGIID:1914720 Length:673 Species:Mus musculus


Alignment Length:713 Identity:178/713 - (24%)
Similarity:318/713 - (44%) Gaps:154/713 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LAFHNLTYRV--------------------KEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGK 91
            |...:|||:|                    ...::.:.:..::.:|.::|||::.||:|.||.|:
Mouse    48 LEVRDLTYQVDIASQVPWFEQLAQFKIPWRSHSSQDSCELGIRNLSFKVRSGQMLAIIGSSGCGR 112

  Fly    92 STLLNILSGY----KTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLK 152
            ::||::::|.    |..|  |.:.:||........||..|::.|.:||..||||:|.:.....::
Mouse   113 ASLLDVITGRGHGGKMKS--GQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMR 175

  Fly   153 LSKKFSKPEKHSMIDDILLTLSLSEHR-----YTMTRNLSGGQKKRLSIALELVSNPPIMFFDEP 212
            |.:.||:.::...::|::..|.|.:..     .|..|.:|||:::|:||.::|:.||.|:..|||
Mouse   176 LPRTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEP 240

  Fly   213 TSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFL 277
            ||||||.|....:..|..||.|.|.|:.::|||.:.:|.:||.:..:..|..:|.|:.:|:|.:.
Mouse   241 TSGLDSFTAHNLVTTLSRLAKGNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGAAQQMVQYF 305

  Fly   278 STLNLECPSYHNPASYVIEVSCGEHGDHTRKLVDAID--NGKRDVRSSADYAGLKARNDLVKVQN 340
            :::...||.|.|||.:.::::             :||  :.:|:| ::.:.|...|...|.|||.
Mouse   306 TSIGHPCPRYSNPADFYVDLT-------------SIDRRSKEREV-ATVEKAQSLAALFLEKVQG 356

  Fly   341 LKAILDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNC 405
            ....|.|.:|                           ||.|.|:..|:        :.:.:..:|
Mouse   357 FDDFLWKAEA---------------------------KELNTSTHTVS--------LTLTQDTDC 386

  Fly   406 TTALLTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGND 470
            .||:   |:       .....||..:::|.:...:||...:.:......|:..:||.|||   ..
Mouse   387 GTAV---EL-------PGMIEQFSTLIRRQISNDFRDLPTLLIHGSEACLMSLIIGFLYY---GH 438

  Fly   471 GAKVLSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNR---WYSLKS-------YYLAI 525
            |||.||     |.:...|::  |...::.|.:.:.|:.|.:..|   :|.|:.       |:.|.
Mouse   439 GAKQLS-----FMDTAALLF--MIGALIPFNVILDVVSKCHSERSMLYYELEDGLYTAGPYFFAK 496

  Fly   526 SVADLPFQAIFCVIYVSIVYYFTS-QPW-ELFRFSMFLSACLLISFVAQSVGLVVGAAM-NVQNG 587
            .:.:||....:.:||...:|:.|: :|. |||.....|  ..|:.|..:::.|...|.: .....
Mouse   497 ILGELPEHCAYVIIYAMPIYWLTNLRPVPELFLLHFLL--VWLVVFCCRTMALAASAMLPTFHMS 559

  Fly   588 VFLAPVMSVPFLLFSGFFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHF 652
            .|....:...|.|.:||.::.|.:.:...||:.||::|:.|.|.                ....|
Mouse   560 SFFCNALYNSFYLTAGFMINLDNLWIVPAWISKLSFLRWCFSGL----------------MQIQF 608

  Fly   653 KSPITTLEELDMVNANFTLDIVA-------------LIVIF-VVLRIS-AYLFLRW-KLKTVR 699
            ...:.|.:     ..|||..|:.             |..|: :|:.|| .:|||.: .||.::
Mouse   609 NGHLYTTQ-----IGNFTFSILGDTMISAMDLNSHPLYAIYLIVIGISYGFLFLYYLSLKLIK 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 76/249 (31%)
3a01204 60..699 CDD:273361 173/678 (26%)
ABC2_membrane 431..630 CDD:279410 52/211 (25%)
Abcg8NP_080456.1 ABCG_White 71..296 CDD:213201 71/226 (31%)
3a01204 89..664 CDD:273361 172/668 (26%)
ABC2_membrane 402..606 CDD:279410 53/231 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3602
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.670

Return to query results.
Submit another query.