DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and bw

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster


Alignment Length:753 Identity:170/753 - (22%)
Similarity:307/753 - (40%) Gaps:202/753 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PAVDLAFHNLTYRVKEGNRSNAK-----------TILKGVSGRLRSGELTAIMGPSGAGKSTLLN 96
            |::.|.:..|.|.|.:..:||..           .||:..||.:::|:|.||:|.|||||:|||.
  Fly    13 PSLCLEWKQLNYYVPDQEQSNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLLA 77

  Fly    97 ILSGYKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPE 161
            .:|.....::.|.|.:||.........::|:::.|........|..|.:...::.|:.::.:|.|
  Fly    78 AISQRLRGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAE 142

  Fly   162 KHSMIDDILLTLSLSEHRYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIH 226
            |...:.|:||.:.|.:..:|..:.||||::||||:|.||:::|..:|.||||:||||.:.:..|.
  Fly   143 KRQRVADLLLAVGLRDAAHTRIQQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIK 207

  Fly   227 LLKML----------------------------AAGG---------------------------- 235
            .|:.|                            |:|.                            
  Fly   208 TLRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALG 272

  Fly   236 -----------RTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHN 289
                       :..||:||||::.:||:|..:..:..|:.||||.|:|...|.:.|..|.|...|
  Fly   273 VLSNSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCN 337

  Fly   290 PASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVS 354
            ||.:.::....:.|                                           |.:|.:|.
  Fly   338 PADFYLKTLADKEG-------------------------------------------KENAGAVL 359

  Fly   355 GRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVE--KSVNCTTALLTEEITSP 417
            ..|||..   .:||.:|            |.|:..:..||.:..|:  |.:.             
  Fly   360 RAKYEHE---TDGLYSG------------SWLLARSYSGDYLKHVQNFKKIR------------- 396

  Fly   418 ERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLG--- 479
                  ..:|.::::.|.:....|:.....:.....::....:..:|..||....:.:.::|   
  Fly   397 ------WIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQRTVQDVGGSI 455

  Fly   480 FLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIV 544
            |:..|.:...: |..:|.: ||..:|::.:|.....|||.:||:|:.::.:|.......:::|::
  Fly   456 FMLSNEMIFTF-SYGVTYI-FPAALPIIRREVGEGTYSLSAYYVALVLSFVPVAFFKGYVFLSVI 518

  Fly   545 Y---YFTSQPWELFRFSMFLSACLLISFVAQSVGLVVGAAMNVQNGVFLAPVM---------SVP 597
            |   |:|.      .|.::||...|:|         :.|...|..||||:.:.         :.|
  Fly   519 YASIYYTR------GFLLYLSMGFLMS---------LSAVAAVGYGVFLSSLFESDKMASECAAP 568

  Fly   598 ----FLLFSGFFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCFQTYCH--FKSPI 656
                ||:|.|.:::.|.:|    .:.|||...|..| ..:..:....:.:.|.....|  .|:.:
  Fly   569 FDLIFLIFGGTYMNVDTVP----GLKYLSLFFYSNE-ALMYKFWIDIDNIDCPVNEDHPCIKTGV 628

  Fly   657 TTLEELDMVNANFT--LDIVALIVIFVVLRISAYLFLR 692
            ..|::....||::|  ||..:|:|:.|:..|.::..:|
  Fly   629 EVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSFGLVR 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 79/301 (26%)
3a01204 60..699 CDD:273361 165/736 (22%)
ABC2_membrane 431..630 CDD:279410 47/217 (22%)
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 75/284 (26%)
3a01204 40..673 CDD:273361 163/726 (22%)
ABC2_membrane 404..604 CDD:279410 48/221 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm14984
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.