DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and Abca14

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_038957098.1 Gene:Abca14 / 365362 RGDID:1561491 Length:1691 Species:Rattus norvegicus


Alignment Length:744 Identity:162/744 - (21%)
Similarity:295/744 - (39%) Gaps:169/744 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WKQFLENNNLLGTAGAGQLKAQIVPAQPKTLQHLPKRPAVDL-AFHNLTYRVKEGNRSNAKTI-L 68
            |..||:.....|.....:.::|:....|..... |:  .||| |...:.:..||....|:..: :
  Rat   489 WNFFLQKTYWFGEPALSREESQVSDLPPSDFME-PE--PVDLEAGIQIQHLYKEFTLKNSTLMAV 550

  Fly    69 KGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKTSSIEGSVTMNGAE--RNLSAFRKLSAYIMQ 131
            |.:|..|..|::|.::|.:||||:|.|:||:|....: :|.|.::|.:  .::...||......|
  Rat   551 KDLSLNLYEGQITVLLGHNGAGKTTTLSILTGLYLPT-KGKVYISGYDISSDMVQVRKSLGLCPQ 614

  Fly   132 DNQLHGNLTVQEAMTVATNLKLSKKFSKP-EKHSMIDDILLTLSLSEHRYTMTRNLSGGQKKRLS 195
            |:.|...|||.|.:.....:|.....::| |.|.|    |.:..|.:...||:::||||.|::||
  Rat   615 DDLLFPLLTVSEHLYFYCVIKGISSTNRPREIHRM----LTSFGLLQKSNTMSKDLSGGMKRKLS 675

  Fly   196 IALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLA 260
            |.:.|:.:..::..||||||:|..:......||:.... .||::.|.|.        .|:...|.
  Rat   676 IIIALIGDTKVVILDEPTSGMDPVSRRAIWDLLQHYKK-DRTILLTTHH--------MDEADVLG 731

  Fly   261 DGQCV-YQGSTKQLVPFLSTLNLECPSYHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSA 324
            |...: ..|..|.....|....|....||   ..:::....:.|..::.:.:.|...:.:...:|
  Rat   732 DRIAILVMGVLKCCGSSLFLKKLYGVGYH---LVIVKTPDSDDGKISQLIKNYIPTAEMETNVAA 793

  Fly   325 DYAGLKARNDLVKVQNLKAIL-DKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVT 388
            :.:.:..:....:...|...| ::.:...:||  :..::|.       |.....|..|::...:.
  Rat   794 ELSFILPKEHTHRFAELFTDLEERQEELGISG--FGVSMTT-------MDEVFFKVSNLADLKLN 849

  Fly   389 TNERGDAMIDVEKSVNCTTALLTEEITSPE---------RYPTSQFHQFW---------VVLKRT 435
            |.....|     .:||.:|:...|.:..|.         ||..|.|:..|         :.:|| 
  Rat   850 TEIAQSA-----STVNPSTSENNENMNVPRNFERSGYSGRYSDSSFNAGWPLYMQQFRAMFIKR- 908

  Fly   436 LLFSYRDWTLMYLRLFAHLLVGF---LIGALYYDIGNDGAKVL---------------------- 475
            ::||:|:|.|:.|:|.|  |.|.   ||..:.:.:..:.|:|:                      
  Rat   909 VMFSWRNWKLLLLQLLA--LQGLTYVLIKGIGFSVPKEPARVMDLEQYGETTVPFSVSGDPPLTQ 971

  Fly   476 ---SNLGFLFFNML------------FLMYTSMTI--TILSFPLEMPVLLKE-NFNRWYSLKSYY 522
               .||..:..:..            :|:.....|  .|::|.|:  |..|| .|..|::.::|:
  Rat   972 KLTKNLEIMLKDKKQKVHEVQGGVQDYLLTNKDCIYSCIVAFSLD--VTRKEKTFTFWFNNEAYH 1034

  Fly   523 ---LAISVADLPFQAIFCVIYVSIVYYFTS--------------QPWE----------------- 553
               |::|:.|            :|::.:.|              ||:.                 
  Rat  1035 ASPLSLSILD------------NIIFKYLSGPDATITVSNKPQPQPFTKGRSEERSASGIQIVFN 1087

  Fly   554 -LFRFSMFLSACLLISFVAQSVGLVVGAAMNVQNGVFLAPVMSVPFLLFS---GFFVSFDA---- 610
             ||..|:|.|...|::...:     |..|.::|   |::.|.::.|.|.:   ...:.|.|    
  Rat  1088 LLFGMSIFTSGFCLMTVTER-----VSKAKHIQ---FVSGVYTLNFWLSALLWDLIIHFVACVLL 1144

  Fly   611 IPVYLRWITYLSYIRYGFEGTALATYGYG 639
            :.|:|....::....|.|..|.|....:|
  Rat  1145 LLVFLYTDVHILLENYNFLDTMLILMLFG 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 68/229 (30%)
3a01204 60..699 CDD:273361 149/689 (22%)
ABC2_membrane 431..630 CDD:279410 55/283 (19%)
Abca14XP_038957098.1 rim_protein <100..1681 CDD:130324 162/744 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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