DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and Abcg3l2

DIOPT Version :10

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0288229 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001406030.1 Gene:Abcg3l2 / 360910 RGDID:1359703 Length:652 Species:Rattus norvegicus


Alignment Length:698 Identity:169/698 - (24%)
Similarity:298/698 - (42%) Gaps:116/698 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AQPKTLQHLPKRPAVDLAFHNLTY--RVKEG----NRSNAKTILKGVSGRLRSGELTAIMGPSGA 89
            :.|:||    ...||.|:|||::|  .|:.|    .::.....|..:||.:..| |.|||||...
  Rat    26 SDPETL----TGEAVVLSFHNISYIETVQSGFPLCQKTRVMERLSSISGIMGPG-LNAIMGPQDG 85

  Fly    90 GKSTLLNILSGYK-TSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKL 153
            .:|.||::|:..: .|.:.|.:.:||..|..: |:..|.|:..::.:.|.:||::.:..:..|:|
  Rat    86 SRSLLLDVLAARRDPSGLSGDILVNGKPRPAN-FKCTSGYVPHNDVVWGTVTVRDNLEFSAALRL 149

  Fly   154 SKKFSKPEKHSMIDDILLTLSLSEHRYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDS 218
            ....::.||...|:::|..|.|.|.:.|..|  |...:||.|||:||:::.||:|.|:||:.||.
  Rat   150 PMTITRDEKRRRINEVLELLHLDEKQNTKPR--SKELRKRTSIAVELIADHPILFLDDPTTYLDF 212

  Fly   219 STCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLE 283
            :|....|.:|:.::..|:|:|.:|:||...:|..||.|..:|.|:.::.|..:..:.:.::... 
  Rat   213 TTTTYIISVLRRMSMKGKTIIFSINQPQYSIFRFFDSLSLVASGKLMFHGPARDALEYFTSAGY- 276

  Fly   284 CPSYHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAILDKN 348
                  ||.:.:::..|...|...   |..:.|..:......|...|      |:.|:.|     
  Rat   277 ------PADFFLDIINGGFCDTEE---DGHEVGNYEELFERQYQATK------KLVNMYA----- 321

  Fly   349 DASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEE 413
                 ..|.:.|.....:.:|                       |...:|...:|..|.|     
  Rat   322 -----QSRLHSDTRARLDQIL-----------------------GQQQLDRNSAVETTCA----- 353

  Fly   414 ITSPERYPTSQFHQ-FWVVLKRTLLFSYRDWTLM-YLRLFAHLLVGFLIGALYYDIGNDGAKVLS 476
                    |..:|| .|:..:.  ..:.|.:.|: .::....:.:..|:|..:..:.||..:|..
  Rat   354 --------TPFWHQLMWITYQS--FKNIRGFLLVTVIQAVIKVTLAALVGITFQFLENDCNEVQI 408

  Fly   477 NLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYV 541
            ..|.|:...:|....|:.:..| |.::....|.|:.:.:|.:..|:....:|||..:.:.....|
  Rat   409 RAGLLYLLTIFQCIASVGVGKL-FVIDRDRFLHEHTSGYYRMSCYFFGKLLADLIPRRLLPSTIV 472

  Fly   542 SIVYYFTSQPWELFRFSMFLSACLLISFVAQSVGLVVGAAMN-VQNGVFLAPVMSVPFLLFSGFF 605
            .|.|:.......:..|...|...:::.|...|:.|.:||..| |.....|..:..|..|.|||..
  Rat   473 LITYFIAGGRMSMSSFFAMLFTVMMLDFSVSSLPLSIGAGKNAVAVPKLLVTIYFVFMLFFSGLS 537

  Fly   606 VSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHFKSPITTLEEL-------- 662
            :...::|..|.||.|.|.:.|||: ..|.....|       |.:|    |..|:|||        
  Rat   538 LYSGSLPPQLSWIQYFSILHYGFK-ALLHNEFLG-------QNFC----PEDTMEELSRCHNYVI 590

  Fly   663 ------------DMVNANFTLDIVALIVIFVVLRISAYLFLRWKLKTV 698
                        |:.:..|..:.:||..|.::|....|:.| .::||:
  Rat   591 CAGEEFLAIQGIDLSSWGFWENHLALACIMIILLTITYVQL-LQVKTL 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 3a01204 60..699 CDD:273361 157/663 (24%)
Abcg3l2NP_001406030.1 3a01204 54..632 CDD:273361 155/659 (24%)

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