DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and Abca15

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_796187.2 Gene:Abca15 / 320631 MGIID:2388709 Length:1668 Species:Mus musculus


Alignment Length:904 Identity:173/904 - (19%)
Similarity:319/904 - (35%) Gaps:293/904 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WKQFLENNNLLG---------TAGAGQLKAQIVPAQPKTL------QHLPKRPAVDLAFHNLTYR 55
            |..||.::...|         |....:::::...|:|..|      :||              ::
Mouse   479 WNFFLMHSYWFGEPPQQKLEITQFYERVESKYFEAEPTDLTAGIQIKHL--------------HK 529

  Fly    56 VKEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSG-YKTSSIEGSVTMNGAERNL 119
            |.:.| :..|..:|.:|..|..|::|.::|.:||||||.|:|||| |..:|.|..|......:::
Mouse   530 VFQKN-NTTKVAIKDLSLNLYEGQVTVLLGHNGAGKSTTLSILSGLYPPTSGEAYVHGEDISQHM 593

  Fly   120 SAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLK-LSKKFSKPEKHSMIDDILLTLSLSEHRYTMT 183
            ...|.......|.|.|..:|||.|.:.....:| :.:|....|.::|    |...:|.|.....:
Mouse   594 DQVRNSLGLCPQQNLLFDHLTVSEHLYFYCRIKGVPQKMYLEETNNM----LSAFNLMEKCDAFS 654

  Fly   184 RNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPS-- 246
            ::||||.|::|:|.:.|:....:...||||||:|.::......:|:.... .||::.|.|...  
Mouse   655 KSLSGGMKRKLAIIIALIGGSKVAILDEPTSGMDPASRRSTWDILQTYKQ-NRTILLTTHYMDEA 718

  Fly   247 ------------------------ARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSY 287
                                    .||:.:...|..:.:..|.....:|.:..::.|..|| .:.
Mouse   719 DVLGDRIAIMVRGTLRCCGSSVFLKRLYGVGSHLVMVKEPYCDIAEISKLIHSYVPTATLE-TNV 782

  Fly   288 HNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDL-VKVQNL---KAILDKN 348
            .|..|:::.   .|:......|..|::..:.::..|:....:....:: :||.||   |..::..
Mouse   783 GNELSFILP---KEYTHRFEALFTALEENQENLGISSFGVSITTMEEVFLKVSNLEDSKTDIEAT 844

  Fly   349 DASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEE 413
            .:.||..:          |..||   |:...|.|.....:.::      ::..:..|:..|    
Mouse   845 QSPSVGSK----------GNKNG---DVESSGRVGFPTQSEDQ------NIVFNTGCSLYL---- 886

  Fly   414 ITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLI------------------ 460
                        .||..:..:.|::::|:|..:.:::...::..||:                  
Mouse   887 ------------QQFRAMFMKRLMYNWRNWRGILVQILGLIISTFLLLKSHEFRYKKIRQMNLDE 939

  Fly   461 ----------------------------------------GALYYDIGND----------GAKVL 475
                                                    ..|.|..|||          ..||:
Mouse   940 YGQTIVPFSIWGKSNLTSSLLTHLENMLKPGNHQLKEVQGDLLKYLEGNDECVHLCVIALSIKVV 1004

  Fly   476 S---NLGFLFFNMLF------------LMYTSM-----TITILSFPLEMPVLLKENFNRW----- 515
            :   ||..||.|..:            :::.|:     :||:.:.|...|     ....|     
Mouse  1005 ANRVNLTVLFNNEAYHSPSLSLTVLDNILFMSLSGSDASITVFNKPQPSP-----QRKEWPGSTD 1064

  Fly   516 YSLKSYYLAISVADLPFQAIFCVIYVS-----------------IVYYFTSQPWELFRFSMFLSA 563
            ..:.::.:.:.:|.|  .:.||::.|:                 :||:.::..::|..|  |:|.
Mouse  1065 GKIVAFKIQLGMALL--VSGFCILTVTERHNKTKHMQFLSGVSILVYWLSALVFDLIIF--FISC 1125

  Fly   564 C-LLISFVAQSVGLVVGAAMNVQNGVFLAPVM---SVPFLLFSGFFVS----------------- 607
            | ||:.|......:.| ...::.:.:.:..:.   ::|......|..|                 
Mouse  1126 CFLLVMFKYCKFDIYV-TDYHILDTMLILTLFGWSAIPLTYLLSFLFSKSNSAYINLLVFCYLSG 1189

  Fly   608 -----FDAIPVYLRWITYLSYIRYGFEGTAL---ATYGYG----------REKLRCFQ------- 647
                 .|.| :..|..|.:|.....|...||   ..|..|          |:|:.|.|       
Mouse  1190 TLSLLMDTI-IEARISTIMSNSTQTFLLNALLLFPMYNLGKCISEYTVIYRKKMLCIQQKNALKY 1253

  Fly   648 TYC---HFKSPITTLEE-------LDMVNANFTLDIVALIVIFVVLRISAYLFLRWKLK 696
            ..|   |.|..|.:|::       :.|..|.|    |.|::||....||      ||:|
Mouse  1254 LNCSNKHTKKNIYSLKKPMLGKYLIAMSIAGF----VFLLLIFFWENIS------WKVK 1302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 63/251 (25%)
3a01204 60..699 CDD:273361 162/835 (19%)
ABC2_membrane 431..630 CDD:279410 48/334 (14%)
Abca15NP_796187.2 ABC2_membrane_3 144..464 CDD:289468
ABC2_membrane <267..383 CDD:304374
CcmA 522..831 CDD:224054 75/332 (23%)
ABC_subfamily_A 522..743 CDD:213230 61/240 (25%)
ABC2_membrane_3 <1009..1231 CDD:289468 40/232 (17%)
CcmA 1354..1648 CDD:224054
ABC_subfamily_A 1354..1575 CDD:213230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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