DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and w

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster


Alignment Length:655 Identity:191/655 - (29%)
Similarity:318/655 - (48%) Gaps:103/655 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 KTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKTSSIE----GSVTMNGAERNLSAFRKL 125
            |.:||.|.|....|||.|:||.|||||:||||.|:......|:    |...:||...:....:..
  Fly   110 KHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQAR 174

  Fly   126 SAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILLTLSLSEHRYTM------TR 184
            .||:.||:...|:||.:|.:.....:::.:..:..::.:.:|.::..||||:.::|:      .:
  Fly   175 CAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVK 239

  Fly   185 NLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARL 249
            .||||::|||:.|.|.:::||::..|||||||||.|....:.:||.|:..|:|||.||||||:.|
  Fly   240 GLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSEL 304

  Fly   250 FEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHNPASYVIEVSCGEHGDHTRKLVDAID 314
            ||:||::..:|:|:..:.|:..:.|.|.|.:..:||:.:|||.:.::|.             |:.
  Fly   305 FELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVL-------------AVV 356

  Fly   315 NGKRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKE 379
            .|:.          :::|:.:.|:.:       |.|.|...|..|..|...|             
  Fly   357 PGRE----------IESRDRIAKICD-------NFAISKVARDMEQLLATKN------------- 391

  Fly   380 GNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPER---YPTSQFHQFWVVLKRTLLFSYR 441
                                          |.:.:..||.   |..:.|.||..||.|:.|...:
  Fly   392 ------------------------------LEKPLEQPENGYTYKATWFMQFRAVLWRSWLSVLK 426

  Fly   442 DWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLGFLFFN-MLFLMYTSMTI-----TILSF 500
            :..|:.:||....:|..|||.::  :|..    |:.:|.:..| .:||..|:||.     ||..|
  Fly   427 EPLLVKVRLIQTTMVAILIGLIF--LGQQ----LTQVGVMNINGAIFLFLTNMTFQNVFATINVF 485

  Fly   501 PLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIVYYFTSQPWELFRFSMFLSACL 565
            ..|:||.::|..:|.|...:|:|..::|:||......:::.:|.|........:..|...|:...
  Fly   486 TSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVT 550

  Fly   566 LISFVAQSVGLVVG-AAMNVQNGVFLAPVMSVPFLLFSGFFVSFDAIPVYLRWITYLSYIRYGFE 629
            |::.|:.|.|.::. |:.:....:.:.|.:.:|||||.|||::..::||||:|::|||:.||..|
  Fly   551 LVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANE 615

  Fly   630 GTAL---ATYGYGREKLRCFQTYCHFKSPITTLEELDMVNANFTLDIVALIVIFVVLRISAYLFL 691
            |..:   |....|........|.|.....: .||.|:...|:..||.|.|.::.|..|:.|||.|
  Fly   616 GLLINQWADVEPGEISCTSSNTTCPSSGKV-ILETLNFSAADLPLDYVGLAILIVSFRVLAYLAL 679

  Fly   692 RWKLK 696
            |.:.:
  Fly   680 RLRAR 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 80/212 (38%)
3a01204 60..699 CDD:273361 191/655 (29%)
ABC2_membrane 431..630 CDD:279410 62/205 (30%)
wNP_476787.1 3a01204 68..687 CDD:273361 191/655 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 79 1.000 Domainoid score I2350
eggNOG 1 0.900 - - E2759_KOG0061
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm14984
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - P PTHR48041
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
109.850

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