Sequence 1: | NP_722605.1 | Gene: | CG3164 / 33171 | FlyBaseID: | FBgn0025683 | Length: | 699 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101191.1 | Gene: | Abca4 / 310836 | RGDID: | 1309445 | Length: | 2290 | Species: | Rattus norvegicus |
Alignment Length: | 231 | Identity: | 66/231 - (28%) |
---|---|---|---|
Similarity: | 110/231 - (47%) | Gaps: | 33/231 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 RPAVDLAFHNLTYRVKEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKTSSI 106
Fly 107 EGSVTMNG--AERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLK-LSKKFSKPEKHSMIDD 168
Fly 169 ILLTLSLSEHRYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAA 233
Fly 234 GGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGS 269 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3164 | NP_722605.1 | ABCG_EPDR | 44..268 | CDD:213180 | 63/226 (28%) |
3a01204 | 60..699 | CDD:273361 | 59/213 (28%) | ||
ABC2_membrane | 431..630 | CDD:279410 | |||
Abca4 | NP_001101191.1 | rim_protein | 1..2249 | CDD:130324 | 66/231 (29%) |
ABC_subfamily_A | 907..1126 | CDD:213230 | 66/231 (29%) | ||
ABC_subfamily_A | 1915..2135 | CDD:213230 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |