DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and Abcg3

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_017176394.1 Gene:Abcg3 / 27405 MGIID:1351624 Length:683 Species:Mus musculus


Alignment Length:665 Identity:161/665 - (24%)
Similarity:292/665 - (43%) Gaps:130/665 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WK----QFLENNNLLGTAGAGQLKAQIVPAQPKTLQHLPKRPAVD---------LAFHNLTYR-- 55
            ||    :...||:           ..::....:.|..||:....|         |:|||::|:  
Mouse    67 WKKEPPEMASNND-----------PTVISMIERHLCDLPETNTSDLKTLTEEAVLSFHNISYQET 120

  Fly    56 VKEG--NRSNAKTI--LKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYK-TSSIEGSVTMNGA 115
            |:.|  .|..|..|  |..:||.::.| |.|||||....:|.||::|:..: ...:.|.:.:||.
Mouse   121 VQSGFPLRKKAYVIERLSNISGIMKPG-LNAIMGPQDGSRSLLLDVLAARRDPRGLSGDILINGK 184

  Fly   116 ERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILLTLSLSEHRY 180
            .|..: |:..|.|:.|::.:.|.:||::.:..:..|:|....::.||...|:::|..|.|::.:.
Mouse   185 PRPAN-FKCTSGYVPQNDVVLGTVTVRDNLEFSAALRLPVTITRDEKRRRINEVLELLHLNKEQN 248

  Fly   181 TMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQP 245
            ...|  |...:||.|||:|||:..||:|.|:||:|||..|....|.:|:.::..|||:|.:|:||
Mouse   249 IKPR--SKELRKRTSIAMELVTEHPILFLDDPTTGLDLRTTTDVILVLRRMSKKGRTIIFSINQP 311

  Fly   246 SARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHNPASYVIEVSCGEHGDHTRKLV 310
            ...:|:.||.|..:|.|:.::.|..:..:.:..:......|::|||.:.::|..|...:    ::
Mouse   312 QYSIFKFFDSLTLVASGKVMFHGPAQDALEYFRSAGYNYESHNNPADFFLDVINGGFSN----IL 372

  Fly   311 DAIDNG----------KRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLN 365
            |..::|          :|..:.:...|.:.|::.|  ....:||||:    .:..:|.|.     
Mouse   373 DTEEDGHEDDKYEELFERQYQVTGKLANMYAQSPL--YSETRAILDQ----LLGEQKLER----- 426

  Fly   366 NGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERYPTSQFHQF-W 429
                             |||:.||               |.|...               ||. |
Mouse   427 -----------------SSAVETT---------------CVTPFC---------------HQLKW 444

  Fly   430 VVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLGFLFFNMLFLMYTSMT 494
            ::.:....|....|..: ::....:::...:|..:..:.||..:|....|.|:...:|...||::
Mouse   445 IICQSFKNFKGFPWVTV-IQAIITVILATAVGTAFRVLKNDCIEVQMRAGLLYLLTIFQCITSVS 508

  Fly   495 ITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADL-PFQAIFCVIYVSIVYYFTSQPWELFRFS 558
            ...| |.::....|.|:.:.:|.:.||:....:|:| |.:.:...::..|.|........:..|.
Mouse   509 AGEL-FVIDRVRFLHEHTSGYYRVSSYFFGKLLAELIPRRLLPSTVFSLITYVIAGVKMSMKCFF 572

  Fly   559 MFLSACLLISFVAQSVGLVVGAAMNVQNGVFLAPVMSVPFLLFSGFFV---SFDAIPVY------ 614
            ..:...:::::.|.|:.|.:||..|         .::||.||.:.:||   .|..:.:|      
Mouse   573 TMICTIMVLAYSASSLPLSIGAGEN---------AVAVPTLLVTIYFVFMLFFSGLSLYSGSFLP 628

  Fly   615 -LRWITYLSYIRYGF 628
             |.||.|.|...|||
Mouse   629 KLSWIQYFSIPHYGF 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 79/239 (33%)
3a01204 60..699 CDD:273361 146/594 (25%)
ABC2_membrane 431..630 CDD:279410 46/209 (22%)
Abcg3XP_017176394.1 3a01204 137..670 CDD:273361 143/584 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.710

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