DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and pdr1

DIOPT Version :10

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0288229 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_593995.1 Gene:pdr1 / 2543363 PomBaseID:SPAPB24D3.09C Length:1396 Species:Schizosaccharomyces pombe


Alignment Length:674 Identity:153/674 - (22%)
Similarity:267/674 - (39%) Gaps:191/674 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IVPAQPKTLQHLPKRPAVD------------LAFHNLTYRVKEGNRSNAKTILKGVSGRLRSGEL 80
            |.|......|..|....||            |.:.:|.:.|.  .:::.|.||..|||.|:...|
pombe   727 IEPQDKPPSQTEPDNKKVDVSTTLSTNDNLVLCWRDLNFTVV--TKTSKKQILTNVSGYLKKNTL 789

  Fly    81 TAIMGPSGAGKSTLLNILS--GYKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQE 143
            ||::|.:.:|||.||.|||  |. ..|:||.:|::|. :|....||...|:.::.......||:|
pombe   790 TALLGENKSGKSVLLRILSQRGI-AGSVEGEITLSGL-KNPKNLRKRIGYVRKNPLFISEYTVRE 852

  Fly   144 AMTVATNLKLSKKFSKPEKHSMIDDILLTLSLSEHR----YTMTRNLSGGQKKRLSIALELVSNP 204
            .:.:...|:.||:.|..|:::.::.::..|.|.|..    ..|.:.||...|:.||||:||.:.|
pombe   853 TLRLHAALRQSKQRSLSEQYAYVEYVIDFLGLGEVADFIVGDMGKGLSLYHKRLLSIAVELSARP 917

  Fly   205 -PIMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTL-ADGQCVYQ 267
             .|:..|||.:||||.:.:..:.:|:.||..|.:::|::.|||:|:.|:||.:..| .:|..||.
pombe   918 GSILLLDEPANGLDSQSAWMLVCILQKLARSGLSILCSVSQPSSRILELFDMMLILDLNGNTVYY 982

  Fly   268 GS----TKQLVPFLSTLNLECPSYHNPASYVIEVSCGEHG--DHTRKLVDAIDNGKRDVRSSA-- 324
            .:    ..:||.:...:                     ||  :|::...|.:.:..:.::...  
pombe   983 DTMGRDLSKLVNYFKRI---------------------HGTNEHSKDTADFVLHCIQFLKQGPEF 1026

  Fly   325 DYAGLKARNDLVK--VQNLKAILDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALV 387
            ||||..|..:..|  ::::..|:|..:                                      
pombe  1027 DYAGAWASTNTHKQIIEHVNFIMDNPE-------------------------------------- 1053

  Fly   388 TTNERGDAMIDVEKSVNCTTALLTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFA 452
                                 |..::..:..|:.||.|.|.:.:..|..:..:||.:|:..|:..
pombe  1054 ---------------------LTDDDFPNETRFMTSFFFQIYKISMRNFVAYWRDSSLLRARVAF 1097

  Fly   453 HLLVGFLIGALYYDIGNDGAKVLSNL--------------------GFLFFNMLFLMYT------ 491
            :::.|.:||..:|..| .|.:...|.                    .|::|..::..|.      
pombe  1098 NIVAGLIIGFSFYKQG-VGVEETQNKMFSAYMLTVASTSTMNGLQPKFIYFRSIYEQYEQNTAIY 1161

  Fly   492 SMTITILSFPLEMPVLLKEN-------FNRWYSLKSYYLAISVADLPFQAIFC--VIYVSIVYYF 547
            |.|..|::|.|...|:   |       |..||....:|....  ::||...|.  ::.:..:||.
pombe  1162 SRTAFIIAFFLVEAVI---NCCFATLFFFGWYYPSGFYEFNH--NIPFYGGFAWLMLMIFTLYYT 1221

  Fly   548 TSQPWELFRFSMFLSACLLISFVAQSVG---LVVGAA---MNVQNGVFLAPVMSVPFLLFSGFFV 606
            |              ..:.|:.::.|:|   ::.|.|   :...||:...|          |..|
pombe  1222 T--------------LGIGIATISPSIGTASIISGTAFVFIQYFNGMIQLP----------GVIV 1262

  Fly   607 SFDAIPVYLRWITYLSYIRYGFEG 630
            .|      .:|:..||..:|..||
pombe  1263 GF------WKWMDALSPYKYFLEG 1280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 3a01204 60..699 CDD:273361 144/630 (23%)
pdr1NP_593995.1 3a01205 40..1382 CDD:273362 153/674 (23%)

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