DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and Abcg4

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_620405.3 Gene:Abcg4 / 192663 MGIID:1890594 Length:646 Species:Mus musculus


Alignment Length:681 Identity:307/681 - (45%)
Similarity:414/681 - (60%) Gaps:77/681 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QLKAQIVPAQPKTLQHLPKRPAVDLAFHNLTYRVKEG---NRSNAKTILKGVSGRLRSGELTAIM 84
            :::..|..||  ...|||||.|||:.|..|:|.|:||   .:...||:||.:||:....||..||
Mouse    39 KVENHITEAQ--RFSHLPKRSAVDIEFVELSYSVREGPCWRKRGYKTLLKCLSGKFCRRELIGIM 101

  Fly    85 GPSGAGKSTLLNILSGYKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVAT 149
            |||||||||.:|||:||:.|.::|.:.:||..|.|..|||:|.|||||:.|..:|||.|||.|:.
Mouse   102 GPSGAGKSTFMNILAGYRESGMKGQILVNGRPRELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSA 166

  Fly   150 NLKLSKKFSKPEKHSMIDDILLTLSLSEHRYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTS 214
            |||||:|  :..|..::.:||..|.|....:|.|..|||||:|||:||||||:|||:||||||||
Mouse   167 NLKLSEK--QEVKKELVTEILTALGLMSCSHTRTALLSGGQRKRLAIALELVNNPPVMFFDEPTS 229

  Fly   215 GLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLST 279
            ||||::|||.:.|:|.||.||||||||||||||:||||||:||.|:.|||:::|....|:|:|..
Mouse   230 GLDSASCFQVVSLMKSLAHGGRTVICTIHQPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKG 294

  Fly   280 LNLECPSYHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAI 344
            |.|.||:|||||.::|||:.||:||....|..|:.||                  |..:...|:.
Mouse   295 LGLHCPTYHNPADFIIEVASGEYGDLNPMLFRAVQNG------------------LCTMAEKKSS 341

  Fly   345 LDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTAL 409
            ..||                                                   |...:|.|..
Mouse   342 PGKN---------------------------------------------------ELPAHCPTCP 355

  Fly   410 LTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKV 474
            ...:......:.||...||.::.:||.|...||..|.:||..:|:|:|.|||.||..||:|.:||
Mouse   356 PELDPIESHTFATSTLTQFCILFRRTFLSILRDTVLTHLRFMSHVLIGVLIGLLYLHIGDDASKV 420

  Fly   475 LSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVI 539
            .:|.|||||:|||||:.::..|:|:|||||.|.::|:.|.||:||:||||.::||:|||.:..|:
Mouse   421 FNNTGFLFFSMLFLMFAALMPTVLTFPLEMAVFMREHLNYWYTLKAYYLAKTMADVPFQVVCPVV 485

  Fly   540 YVSIVYYFTSQPWELFRFSMFLSACLLISFVAQSVGLVVGAA-MNVQNGVFLAPVMSVPFLLFSG 603
            |.||||:.|.||.|..||.:|.:..:..:.||||:||::||| .::|...|:.||.::|.|||||
Mouse   486 YCSIVYWMTGQPAETSRFLLFSALAIATALVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSG 550

  Fly   604 FFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHFKSPITTLEELDMVNAN 668
            |||||..||.||:|.:||||:||||||..|..||..|..|.|....|.|:.|...|.|||:..|.
Mouse   551 FFVSFKTIPTYLQWSSYLSYVRYGFEGLILTIYGMERGHLTCLDEQCPFRDPQIILRELDVEEAK 615

  Fly   669 FTLDIVALIVIFVVLRISAYLFLRWKLKTVR 699
            ..:|.:.|.:.|:.||:.|||.||:::|:.|
Mouse   616 LYMDFLVLGIFFLALRLLAYLVLRYRVKSER 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 131/226 (58%)
3a01204 60..699 CDD:273361 289/639 (45%)
ABC2_membrane 431..630 CDD:279410 105/199 (53%)
Abcg4NP_620405.3 3a01204 44..646 CDD:273361 306/674 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 144 1.000 Domainoid score I4581
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.800

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