DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and abcx-1

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_495321.3 Gene:abcx-1 / 183860 WormBaseID:WBGene00006522 Length:710 Species:Caenorhabditis elegans


Alignment Length:730 Identity:151/730 - (20%)
Similarity:282/730 - (38%) Gaps:179/730 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RPAVDLAFHNLTYRVKEGNRSNAKTILK---------GVSGRLRSGELTAIMGPSGAGKSTLLNI 97
            ||..:|..:.|::. |:...|:.|.:|:         .:|..|.|.::.|||....:...:||.|
 Worm    66 RPYPNLLLNKLSFS-KDLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMYTKESETISLLKI 129

  Fly    98 LSGYK--TSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKP 160
            :.|.|  ...:.|.:.:||...:.....|...::..::.. ..|:|::.:.|..|      |..|
 Worm   130 ICGIKDVRGKLSGDILVNGHRMSRDRLEKTIGFVSLESPT-STLSVRQYLHVHGN------FYPP 187

  Fly   161 --EKHS----MIDDILLTLSLSEHRYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLD-S 218
              |::.    :|:.::..|.|......:...|:..|.:|:.:|.:||.:|.|:...:....:| .
 Worm   188 MTERYGGVGHLINKLMTDLGLFPVSDIICSRLNRSQWQRVKVASQLVRDPTILVCSDIFKDIDVH 252

  Fly   219 STCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLE 283
            ..||...:|.:......|.||..|...|.::..||.:...||.|:.:|.|..|.:..:..|:...
 Worm   253 DQCFLIDYLREWAVKTNRIVIMAISPTSLQILNMFSKAMILASGRMIYFGPPKSMQQYFETIGCP 317

  Fly   284 CPSYHNPASYVIEVSCGEH--GDHTR-------KLVDAIDNGKRDVRSSADYAGLKARNDLVKVQ 339
            ||.|.|...|.:::...::  .|.:|       :||:..:.....||.:|  :|           
 Worm   318 CPPYKNVCDYYVDLVTHDNLTSDASRESSVRIARLVNKWNQTAPPVRRTA--SG----------- 369

  Fly   340 NLKAILDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVN 404
              |.:||...|..     :.:.|||.:......:|      |.:|.:.       .::.:.....
 Worm   370 --KFLLDLPTAGI-----FMNLLTLISLFWFNFIN------NRASRIF-------FLLFIFSLST 414

  Fly   405 CTTALLTE-EITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLL----VGFL----- 459
            |.:..|:: .:|.|:.:           |.|.   ||.:..:.|:.||..|:    ..||     
 Worm   415 CLSLHLSDLSLTLPDAF-----------LNRN---SYLELLIFYVPLFIGLVNLKKCTFLSEFDK 465

  Fly   460 ----IGALYYDIGNDGAKVLSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLL------------ 508
                |.|.::         |..|  |..:.|..|.:|::|.|:||.:|:|.||            
 Worm   466 FYLFISARHH---------LKEL--LKLSPLKNMCSSLSIIIVSFVVELPFLLITSMVFAMPMSI 519

  Fly   509 -----KENFNRWYSL----KSYYLAISVADLPFQAIFCVIYVSIVYYFTSQPWELFRFSMFLSAC 564
                 :::.|...||    .|:::.:||..|...::..:....:.::|....|    ||:|. ||
 Worm   520 FTDFHQKSSNHLTSLVSISSSFFINLSVTQLVVNSVSNLSSEPLSFFFFVISW----FSLFF-AC 579

  Fly   565 LLISFVAQSVGLVVGAAMNVQNGVFLAPVMSVPFLLFSGFFVSFDAIPVYLRWITYLSYIRYGFE 629
                    .....:.:.:...|.:|. |..||...|:.      |:..:|.:....||       
 Worm   580 --------GFPFPIHSILKYFNPLFF-PTTSVFRFLYE------DSPSLYPQLSVNLS------- 622

  Fly   630 GTALATYGYGR-------------EKLRCFQ--TYCHFKSPITTLEEL--DMVNANFTLDIV--A 675
             |.:..|..||             :|:..|:  :|..|.......:.:  .::.:||..:.:  :
 Worm   623 -TPIQLYSCGRTFLNTTQVTRGPCQKVSSFELLSYYGFNESFDKQKSIFHGILISNFIFNYLFFS 686

  Fly   676 LIVIFVVLRISAYLF 690
            ::::||    |..||
 Worm   687 ILILFV----SCVLF 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 54/241 (22%)
3a01204 60..699 CDD:273361 146/712 (21%)
ABC2_membrane 431..630 CDD:279410 50/232 (22%)
abcx-1NP_495321.3 P-loop_NTPase 102..302 CDD:304359 48/206 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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