DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and wht-4

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_494495.3 Gene:wht-4 / 173671 WormBaseID:WBGene00017179 Length:636 Species:Caenorhabditis elegans


Alignment Length:605 Identity:177/605 - (29%)
Similarity:304/605 - (50%) Gaps:102/605 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LAFHNLTYRVKE--GNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSGYKTSSIE-- 107
            :|:..|...|.:  |.|   |.:::.|||....||:.|:||.|||||:||:|||:...|:.:|  
 Worm    34 IAWSGLVATVPQAGGGR---KEVIRNVSGVAEPGEVLALMGGSGAGKTTLMNILAHLDTNGVEYL 95

  Fly   108 GSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILLT 172
            |.||:||.:......|::.||:.|.:...|.|||:|.:|...:::: |..:..:|...::::|..
 Worm    96 GDVTVNGKKITKQKMRQMCAYVQQVDLFCGTLTVREQLTYTAHMRM-KNATVQQKMERVENVLRD 159

  Fly   173 LSLSEHRYTM------TRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKML 231
            ::|::.:.|:      .:.:|.|:||||:.|.|::::|.|:|.||||||||:....:.:..|..|
 Worm   160 MNLTDCQNTLIGIPNRMKGISIGEKKRLAFACEILTDPKILFCDEPTSGLDAFMASEVVRALLDL 224

  Fly   232 AAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTL--NLECPSYHNPASYV 294
            |..|:|:|..:||||:.:|.||.::..:|.|:.||.|:..:|.||...|  :...|..:|||.:|
 Worm   225 ANKGKTIIVVLHQPSSTVFRMFHKVCFMATGKTVYHGAVDRLCPFFDKLGPDFRVPESYNPADFV 289

  Fly   295 I-EVSCG---EHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVSG 355
            : |:|..   |..|.||                .:|...:.:|..:..|.||             
 Worm   290 MSEISISPETEQEDVTR----------------IEYLIHEYQNSDIGTQMLK------------- 325

  Fly   356 RKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERY 420
                                     ...:|:......||                 :|.....||
 Worm   326 -------------------------KTRTAVDEFGGYGD-----------------DEDDGESRY 348

  Fly   421 PTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLGFLFFN- 484
            .::...||.::|||:|..::||..|:.:|....|....|:|.:.:.:...| ..:.||..:.:| 
 Worm   349 NSTFGTQFEILLKRSLRTTFRDPLLLRVRFAQILATAILVGIVNWRVELKG-PTIQNLEGVMYNC 412

  Fly   485 ---MLFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIVYY 546
               |.||.|......|.|   |:||.|:|:.:..||:::|:||.|:|:||...|..:||.:|:|:
 Worm   413 ARDMTFLFYFPSVNVITS---ELPVFLREHKSNIYSVEAYFLAKSLAELPQYTILPMIYGTIIYW 474

  Fly   547 FTSQPWELFRFSMFLSACLLISFVAQSVGLVVGAAMNVQNG--VFLAPVMSVPFLLFSGFFVSFD 609
            .......:..|.:|:..|:.:::||.|:. .|||.:....|  |...|:..:|.|:|.||:|:.:
 Worm   475 MAGLVASVTSFLVFVFVCITLTWVAVSIA-YVGACIFGDEGLVVTFMPMFVLPMLVFGGFYVNAN 538

  Fly   610 AIPVYLRWITYLSYIRYGFE 629
            :||||.::::::|:.::|||
 Worm   539 SIPVYYQYVSFVSWFKHGFE 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 82/230 (36%)
3a01204 60..699 CDD:273361 173/590 (29%)
ABC2_membrane 431..630 CDD:279410 66/205 (32%)
wht-4NP_494495.3 3a01204 49..636 CDD:273361 173/590 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.750

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