DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and Abcg8

DIOPT Version :10

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0288229 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_569098.2 Gene:Abcg8 / 155192 RGDID:620300 Length:672 Species:Rattus norvegicus


Alignment Length:627 Identity:160/627 - (25%)
Similarity:284/627 - (45%) Gaps:115/627 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LAFHNLTYRV--------------------KEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGK 91
            |...:|||:|                    ..|::.:....::.:|.::|||::.||:|.:|.|:
  Rat    47 LEVRDLTYQVDMASQVPWFEQLAQFKLPWRSRGSQDSWDLGIRNLSFKVRSGQMLAIIGSAGCGR 111

  Fly    92 STLLNILSGY----KTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLK 152
            :|||::::|.    |..|  |.:.:||........:|..|::.|.:||..||||:|.:|....::
  Rat   112 ATLLDVITGRDHGGKMKS--GQIWINGQPSTPQLIQKCVAHVRQQDQLLPNLTVRETLTFIAQMR 174

  Fly   153 LSKKFSKPEKHSMIDDILLTLSLSEHR-----YTMTRNLSGGQKKRLSIALELVSNPPIMFFDEP 212
            |.|.||:.::...::|::..|.|.:..     .|..|.:|||:::|:||.::|:.||.|:..|||
  Rat   175 LPKTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEP 239

  Fly   213 TSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFL 277
            ||||||.|....:..|..||.|.|.|:.::|||.:.:|.:||.:..:..|..:|.|..:.:|.:.
  Rat   240 TSGLDSFTAHNLVRTLSRLAKGNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGVAQHMVQYF 304

  Fly   278 STLNLECPSYHNPASYVIEVSCGEHGDHTRKLVDAID-NGKRDVRSSADYAGLKARNDLVKVQNL 341
            :::...||.|.|||.:.::::             :|| ..|....::.:.|.|.|...|.|||..
  Rat   305 TSIGYPCPRYSNPADFYVDLT-------------SIDRRSKEQEVATMEKARLLAALFLEKVQGF 356

  Fly   342 KAILDKNDASSVSGRKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCT 406
            ...|.|.:|.|:....|..:.||.                                   :..||.
  Rat   357 DDFLWKAEAKSLDTGTYAVSQTLT-----------------------------------QDTNCG 386

  Fly   407 TALLTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDG 471
            ||   .|:       .....||..:::|.:...:||...:::......|:..:||.|||   ...
  Rat   387 TA---AEL-------PGMIQQFTTLIRRQISNDFRDLPTLFIHGAEACLMSLIIGFLYY---GHA 438

  Fly   472 AKVLSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKENFNR---WYSLKS-------YYLAIS 526
            .|.||     |.:|..|::  |...::.|.:.:.|:.|.:..|   :|.|:.       |:.|..
  Rat   439 DKPLS-----FMDMAALLF--MIGALIPFNVILDVVSKCHSERSLLYYELEDGLYTAGPYFFAKV 496

  Fly   527 VADLPFQAIFCVIYVSIVYYFTS-QPW-ELFRFSMFLSACLLISFVAQSVGLVVGAAM-NVQNGV 588
            :.:||....:.:||...:|:.|: :|. |||.....|  ..|:.|..:::.|...|.: ......
  Rat   497 LGELPEHCAYVIIYGMPIYWLTNLRPGPELFLLHFML--LWLVVFCCRTMALAASAMLPTFHMSS 559

  Fly   589 FLAPVMSVPFLLFSGFFVSFDAIPVYLRWITYLSYIRYGFEG 630
            |....:...|.|.:||.::.:.:.:...||:.:|::|:.|.|
  Rat   560 FCCNALYNSFYLTAGFMINLNNLWIVPAWISKMSFLRWCFSG 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 3a01204 60..699 CDD:273361 154/594 (26%)
Abcg8NP_569098.2 ABCG_White 60..295 CDD:213201 73/236 (31%)
3a01204 88..662 CDD:273361 154/586 (26%)

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