DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and Abcg5

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_446206.2 Gene:Abcg5 / 114628 RGDID:620298 Length:652 Species:Rattus norvegicus


Alignment Length:673 Identity:165/673 - (24%)
Similarity:298/673 - (44%) Gaps:110/673 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 YRVKEGNRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILSG--YKTSSIEGSVTMNGAE 116
            :.:|...:...:.|||.||..:.||:...|:|.||:||:|||:.:||  .:|.::||.|.:||.|
  Rat    56 WNIKSCQQKWDRKILKDVSLYIESGQTMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCE 120

  Fly   117 RNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMIDDILLTLSLSEHRYT 181
            .....|:...:|::|.:....:|||:|.:.....|.| :..|.......::.:|..||||.....
  Rat   121 LRRDQFQDCVSYLLQSDVFLSSLTVRETLRYTAMLAL-RSSSADFYDKKVEAVLTELSLSHVADQ 184

  Fly   182 MTRN-----LSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICT 241
            |..|     :|.|:::|:|||.:|:.:|.:|..||||:|||..|....:.||..||...|.||.|
  Rat   185 MIGNYNFGGISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANHIVLLLVELARRNRIVIVT 249

  Fly   242 IHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHNPASYVIEVSCGEHGDHT 306
            ||||.:.||..||::..|..|:.|:.|:.::::.|.:.....||.:.||..:.::::        
  Rat   250 IHQPRSELFHHFDKIAILTYGELVFCGTPEEMLGFFNNCGYPCPEHSNPFDFYMDLT-------- 306

  Fly   307 RKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVSGRKYEDNLTLNNGLLNG 371
                 ::|...|: |....|.         :||.|::...::|                      
  Rat   307 -----SVDTQSRE-REIETYK---------RVQMLESAFRQSD---------------------- 334

  Fly   372 MVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERYPTSQFHQFWVVLKRTL 436
            :.:.|::                   ::|::.:..|..:   :....:.|...|.:..|:|:|..
  Rat   335 ICHKILE-------------------NIERTRHLKTLPM---VPFKTKNPPGMFCKLGVLLRRVT 377

  Fly   437 LFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAK--VLSNLGFLFFNMLFLMYTSMTITILS 499
            ....|:..::.:||..:|::|..:......:.|:..|  |...:|.|:..:....||.|...:..
  Rat   378 RNLMRNKQVVIMRLVQNLIMGLFLIFYLLRVQNNMLKGAVQDRVGLLYQLVGATPYTGMLNAVNL 442

  Fly   500 FPLEMPVLLKEN----FNRWYSLKSYYLAISVADLPFQAIFCVIYVSIVYYFTSQPWELFRFSMF 560
            ||:...|..:|:    :.:|..|.:|.|..    |||..:..||:.|:.|:......|:.||..|
  Rat   443 FPMLRAVSDQESQDGLYQKWQMLLAYVLHA----LPFSIVATVIFSSVCYWTLGLYPEVARFGYF 503

  Fly   561 LSACLLISFVAQSVGLVVGAAM---NVQNGVFLAPVMSVPFLLF-SGFFVSFDAIPVYLRWITYL 621
            .:|.|....:.:.:.||:...:   |:.|.:  ..::|:..||. |||..:.:.:|:.|:.:.|.
  Rat   504 SAALLAPHLIGEFLTLVLLGMVQNPNIVNSI--VALLSISGLLIGSGFIRNIEEMPIPLKILGYF 566

  Fly   622 SYIRYGFEGTALATYGYGREKLRC--------FQTYCHFKSPITTLEE-LDMVNANFTLDIVAL- 676
            ::.:|..|...:..: ||. ...|        ....|.....|..:|: .....:.||.:.:.| 
  Rat   567 TFQKYCCEILVVNEF-YGL-NFTCGGSNTSVPNNPMCSMTQGIQFIEKTCPGATSRFTTNFLILY 629

  Fly   677 -------IVIFVVLRISAYLFLR 692
                   |:..||.::..||..|
  Rat   630 SFIPTLVILGMVVFKVRDYLISR 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 79/220 (36%)
3a01204 60..699 CDD:273361 164/667 (25%)
ABC2_membrane 431..630 CDD:279410 50/208 (24%)
Abcg5NP_446206.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
ABCG_White 50..276 CDD:213201 79/220 (36%)
3a01204 61..646 CDD:273361 161/660 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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