DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3164 and abcg4

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_004916110.1 Gene:abcg4 / 101734071 XenbaseID:XB-GENE-22063023 Length:639 Species:Xenopus tropicalis


Alignment Length:670 Identity:311/670 - (46%)
Similarity:419/670 - (62%) Gaps:86/670 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 HLPKRPAVDLAFHNLTYRVKEG---NRSNAKTILKGVSGRLRSGELTAIMGPSGAGKSTLLNILS 99
            |||||.|||:.|.:|:|.|:||   .:...||:||.:||...|.||..||||||||||||:|||:
 Frog    48 HLPKRSAVDIEFKDLSYSVREGPCWRKRGYKTLLKCLSGMFCSRELIGIMGPSGAGKSTLMNILA 112

  Fly   100 GYKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHS 164
            ||:.|.:.|.:.:||.:|.|..|||:|.|||||:.|..:|||:|||.|:|||||::|....:|  
 Frog   113 GYRESGMTGQILVNGKQRELRTFRKMSCYIMQDDMLLPHLTVKEAMMVSTNLKLNEKMEVKKK-- 175

  Fly   165 MIDDILLTLSLSEHRYTMTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLK 229
            ::::||..|.|.:...|.|..|||||:|||:||||||:|||:||||||||||||::|||.:.||.
 Frog   176 LVNEILTALGLLDCSGTRTLFLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLLN 240

  Fly   230 MLAAGGRTVICTIHQPSARLFEMFDQLYTLADGQCVYQGSTKQLVPFLSTLNLECPSYHNPASYV 294
            .||.||||:|||||||||:|||||::||.|:.|||:|:||...|:|:|..|.|.||:|||||.::
 Frog   241 SLAQGGRTIICTIHQPSAKLFEMFNKLYILSQGQCIYRGSVTHLIPYLKGLGLHCPTYHNPADFI 305

  Fly   295 IEVSCGEHGDHTRKLVDAIDNG----KRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVSG 355
            ||::.||:||....|..|:::|    .||                 |.|..|  ||:....:   
 Frog   306 IELASGEYGDLNPLLFRAVEDGLCPITRD-----------------KSQQTK--LDQEHCPN--- 348

  Fly   356 RKYEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERY 420
                                                  |..:.||.                ..:
 Frog   349 --------------------------------------DVSVHVES----------------HTF 359

  Fly   421 PTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFAHLLVGFLIGALYYDIGNDGAKVLSNLGFLFFNM 485
            .||..:||.::.|||.|...||..|.:||..:||.:|.|||.||..||:|.:||.:|.|||||:|
 Frog   360 ATSSLNQFCILFKRTFLSILRDTVLTHLRFMSHLCIGVLIGLLYLHIGDDASKVFNNTGFLFFSM 424

  Fly   486 LFLMYTSMTITILSFPLEMPVLLKENFNRWYSLKSYYLAISVADLPFQAIFCVIYVSIVYYFTSQ 550
            ||||:.::..|:|:|||||.|.|:|:.|.|||||:||||.::||:|||.:..|.|.||||:.|||
 Frog   425 LFLMFAALMPTVLTFPLEMSVFLREHLNYWYSLKAYYLAKTMADVPFQIVCPVAYCSIVYWMTSQ 489

  Fly   551 PWELFRFSMFLSACLLISFVAQSVGLVVGAAMN-VQNGVFLAPVMSVPFLLFSGFFVSFDAIPVY 614
            |.|:.||.:|.:.....:.||||:||::|.|.| :|...|:.||.::|.||||||||||..||.|
 Frog   490 PPEVSRFLLFSALATSTALVAQSLGLLIGVASNSLQVATFVGPVTAIPVLLFSGFFVSFKTIPTY 554

  Fly   615 LRWITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHFKSPITTLEELDMVNANFTLDIVALIVI 679
            |:|.:|:||:||||||..||.||..|..|:|.:..|.|:.|...|:|||:.:|...:|.:.|...
 Frog   555 LQWCSYISYVRYGFEGVILAIYGMDRAPLQCRELPCTFQLPQQVLQELDVEDAKLYVDFLVLGGF 619

  Fly   680 FVVLRISAYLFLRWKLKTVR 699
            |:.||:.|||.||:::|:.|
 Frog   620 FLGLRLLAYLVLRYRVKSER 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 132/226 (58%)
3a01204 60..699 CDD:273361 296/643 (46%)
ABC2_membrane 431..630 CDD:279410 108/199 (54%)
abcg4XP_004916110.1 3a01204 40..639 CDD:273361 310/668 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I9946
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177791at33208
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm9360
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.020

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