DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3164 and abca10

DIOPT Version :9

Sequence 1:NP_722605.1 Gene:CG3164 / 33171 FlyBaseID:FBgn0025683 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_031750511.1 Gene:abca10 / 100485734 XenbaseID:XB-GENE-6464279 Length:1610 Species:Xenopus tropicalis


Alignment Length:861 Identity:186/861 - (21%)
Similarity:310/861 - (36%) Gaps:285/861 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LKAQIVPAQPKTLQHLPKRPAVDL------AFHNL--TYRVKEGNRSNAKTILKGVSGRLRSGEL 80
            |.||...:...:|.|..::...||      ..|.:  ||..|:.|..    .|:.:...:..|::
 Frog   448 LMAQTDDSGESSLGHFVEKVPADLHGKEAIRIHGVKKTYYDKDKNTE----ALRDLDLNIYEGQI 508

  Fly    81 TAIMGPSGAGKSTLLNILSGYKTSSIEGSVTMNGAE----RNLSAFRKLSAYIMQDNQLHGNLTV 141
            ||::|.|||||:||||||||...:| .||.|:...:    |:|...:|...:..|.:.....|||
 Frog   509 TALLGHSGAGKTTLLNILSGMCPTS-GGSATVCNYKLSNMRHLGEIKKRVGFCPQGDIKFDPLTV 572

  Fly   142 QEAMTVATNLKLSKKFSKPEKHSMIDDILLTLSLSEHRYTMTRNLSGGQKKRLSIALELVSNPPI 206
            :|.:||...:|...  ||...|. :..:|..|.:::........||||||::|:..:.::.:|.:
 Frog   573 KENLTVFAMIKGIP--SKEVAHK-VQTVLSDLQMNDIENIEASKLSGGQKRKLTFGIAILGDPQV 634

  Fly   207 MFFDEPTSGLDS---------------------STCF-------------------QCI------ 225
            :..||||:|||.                     ||.|                   :|:      
 Frog   635 LLLDEPTAGLDPCSRHNIWTILKESKADRVTLLSTQFMDEADILADRKVVISKGKLKCVGTSLFL 699

  Fly   226 --------HLLKMLAAGG----RTVICTIHQPSARL----------------FEMFDQLYTLADG 262
                    ||...::...    .|.|...|.||.:|                .::|..|:...||
 Frog   700 KRKWGVGYHLRMQVSPSCDVELMTSIIKQHIPSTKLTTQNEEELTYTLPFENMDVFPDLFLHLDG 764

  Fly   263 QCVYQGSTKQLVPF---LSTLN-----------LECPSY--HNPASYVIEVSCGEHGDHTRKLVD 311
            |.   |::  :|.:   ::||:           :|...|  .||.|...|    :..|.:.::.:
 Frog   765 QV---GNS--IVNYGVSMTTLDDVFLKLEGEGEIESGDYDVFNPESRTNE----DREDFSTEMEE 820

  Fly   312 AI----DNG----------KRDVRSSADYAGLKARND------------LVKVQNLKAILDKN-- 348
            ::    |:|          ::.|.:.|....||.|:|            ::.:..:..|:..|  
 Frog   821 SLLQMSDSGNVTLSGWELWRQQVLAVARIRLLKLRHDTKSFRSILLLLVVITLPPIIIIITSNIV 885

  Fly   349 ---DASSVS------------GRKYEDNLTLNNGLLNGMVNDI---VKEGNVSSALV-------T 388
               ||..::            .:.|.|.|..||  ....:.|.   |||.|:...:|       |
 Frog   886 NTFDAWELTPHLYFQSPRNRLNKYYTDLLICNN--TGSSIEDFVGAVKEQNIEVQVVNGEYDTET 948

  Fly   389 TNERGDAMI-DVEKSVNCTTALLTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWTLMYLRLFA 452
            ...||...: .:||..|.|.      :.:|:.:.:..          .||....:..|..|::..
 Frog   949 VKYRGAIEVSQMEKGYNFTI------VANPKAFNSLP----------VLLNIISNALLKILKVSG 997

  Fly   453 HLLVGFLIGALYYDIGNDGAKV-----LSNLGFLFFNMLFLMYTSMTITILSFPLEMPVLLKEN- 511
            |..|      ..:.|..||..:     :|.:.|:.|...|..:.:|:.|            ::| 
 Frog   998 HFRV------WNHPITTDGTDIIFLPYMSLIFFIIFASAFCPHIAMSST------------EDNR 1044

  Fly   512 FNRWYSLK-------SYYLAISVADLPFQAIFCVIYVSIVYYFTSQPWELFRFSMFLSACLLISF 569
            .|....|:       :|:...::.|:....|...:.|:|.:.|.|.              :|:.|
 Frog  1045 INARNQLRISGLFPSAYWFGQALVDVILYWILLFLMVAIYFAFNSY--------------ILLDF 1095

  Fly   570 VAQSVGLVVGAAMNVQNGVFLAPVMSVPFLLF------------SGFFVSFDAIPV------YLR 616
            |...| :::|..     |...|.|:.|..:.|            |.|||.....||      ..|
 Frog  1096 VPAMV-MIIGII-----GYGTAMVLYVYVISFIFGRGKSHTDSWSLFFVITSTFPVMFMDVFMFR 1154

  Fly   617 WITYLSYIRYGFEGTALA---TYGYGREKLRCFQTYCHFKSPITTLEELDMVNANFTLDIVALIV 678
            ..|...::   |..:||:   .|.|   :|:.|..    .|..|.|.|.       ....:.:|:
 Frog  1155 LFTIYYFV---FPASALSGIMEYTY---RLQVFPG----GSEYTALIEQ-------CTPYLHIII 1202

  Fly   679 IFVVLRISAYLFLRWK 694
            .||:|     .||.||
 Frog  1203 FFVLL-----WFLEWK 1213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3164NP_722605.1 ABCG_EPDR 44..268 CDD:213180 77/309 (25%)
3a01204 60..699 CDD:273361 175/817 (21%)
ABC2_membrane 431..630 CDD:279410 44/229 (19%)
abca10XP_031750511.1 rim_protein <107..1597 CDD:130324 186/861 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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