DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4822 and PDR12

DIOPT Version :10

Sequence 1:NP_608493.2 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_015267.1 Gene:PDR12 / 856049 SGDID:S000005979 Length:1511 Species:Saccharomyces cerevisiae


Alignment Length:720 Identity:176/720 - (24%)
Similarity:311/720 - (43%) Gaps:153/720 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NADSLEPDQSE----------DFQTVLGLKYLPSWPAVNLQFSELCYVVPDQTNASKTKTILRRV 79
            |||:....:.|          |.:.|:..|.:.:|       :.|.|.:|..   ..|:.:|..|
Yeast   810 NADARTASREEMMEALNGPNVDLEKVIAEKDVFTW-------NHLDYTIPYD---GATRKLLSDV 864

  Fly    80 NGMFHSHELTAIIGPSGAGKTTLLNLLA---GFGAVCESGEILVNNSPRDMRVFRKMSRYIMQTD 141
            .|.....::||::|.||||||||||:||   ..|.:  :|::|||..|.... |.:...|:.|.|
Yeast   865 FGYVKPGKMTALMGESGAGKTTLLNVLAQRINMGVI--TGDMLVNAKPLPAS-FNRSCGYVAQAD 926

  Fly   142 VLDSQFTVLEMMILAANLKLGKELNLKQKLEVIDEILGMLRLKDTLNTMAQKLSGG----ERKRL 202
            ...::.:|.|.:..||.|:....:.|::|.|.:::|:.:|.:::....:..|...|    :||:|
Yeast   927 NHMAELSVRESLRFAAELRQQSSVPLEEKYEYVEKIITLLGMQNYAEALVGKTGRGLNVEQRKKL 991

  Fly   203 CIALELVNNPP-VIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAKIFEMLDAVYV 266
            .|.:|||..|. ::||||||:|||..|:...:..::.||..|::::|:||.|||.:||..|.:.:
Yeast   992 SIGVELVAKPSLLLFLDEPTSGLDSQSAWSIVQFMRALADSGQSILCTIHQPSATLFEQFDRLLL 1056

  Fly   267 LAE-GQCVYQGK-GSNIVPFLKNF----GLCCPITYNPADFIIEVACLEYGGS------YHEPMV 319
            |.: |:.||.|. |.|....||.|    |:.|.::.|||::|:.  |:..|.:      :|:   
Yeast  1057 LKKGGKMVYFGDIGPNSETLLKYFERQSGMKCGVSENPAEYILN--CIGAGATASVNSDWHD--- 1116

  Fly   320 EAVGNGKVARW--SPPAVEGETTTTKTDTTSGASSFYERDQFDEEISPKLLEAKCSWWLQYKLLL 382
                     .|  ||..........:...|....:..:    |.|::.:.   ..|:..|.|.:|
Yeast  1117 ---------LWLASPECAAARAEVEELHRTLPGRAVND----DPELATRF---AASYMTQIKCVL 1165

  Fly   383 VRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFNFGFMF-TIVIAYLYLPMMPV 446
            .|..:|.||...||:.||:..:..||.||..|.|:..|...|:..|..:| .::||...:..:.|
Yeast  1166 RRTALQFWRSPVYIRAKFFECVACALFVGLSYVGVNHSVGGAIEAFSSIFMLLLIALAMINQLHV 1230

  Fly   447 LLYFPTEINLLKREYNN--QWYRLSSYYAAMVT--SKLPSMFILAVIYLSIVY--LMSSQPLEWF 505
            ..|...|:..::...:|  .|..|...:||:..  |.|.........|....:  ..|.....:|
Yeast  1231 FAYDSRELYEVREAASNTFHWSVLLLCHAAVENFWSTLCQFMCFICYYWPAQFSGRASHAGFFFF 1295

  Fly   506 RFAMLFTIAFVTALTSDSFGL-------------LISSRLSLVNAMFMG---PVLAVPL----IL 550
            .:.::|.:.|||      :||             :|:|.|.....:|.|   |...:|.    ::
Yeast  1296 FYVLIFPLYFVT------YGLWILYMSPDVPSASMINSNLFAAMLLFCGILQPREKMPAFWRRLM 1354

  Fly   551 LSIYGIGYGGGTYISPLMRFLMHLSYLRHSMEGLVASLYDYGRAD-------------------- 595
            .::....|.....::||:          |:.: :|.:.::|...|                    
Yeast  1355 YNVSPFTYVVQALVTPLV----------HNKK-VVCNPHEYNIMDPPSGKTCGEFLSTYMDNNTG 1408

  Fly   596 -----TICEDTEIFCSFKKSKVLLAFLG------FENMHYLWSLSCLMSFYLLFTVAA----YFM 645
                 |..|:.: :|.:.....::|...      :.|..::|:       |:.|.:||    |::
Yeast  1409 YLVNPTATENCQ-YCPYTVQDQVVAKYNVKWDHRWRNFGFMWA-------YICFNIAAMLICYYV 1465

  Fly   646 IRLRL 650
            :|:::
Yeast  1466 VRVKV 1470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_608493.2 3a01204 67..654 CDD:273361 165/668 (25%)
PDR12NP_015267.1 3a01205 89..1468 CDD:273362 175/716 (24%)

Return to query results.
Submit another query.