DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and Abcg1

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_445954.2 Gene:Abcg1 / 85264 RGDID:620294 Length:666 Species:Rattus norvegicus


Alignment Length:680 Identity:265/680 - (38%)
Similarity:386/680 - (56%) Gaps:68/680 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METASSVKGSTTSQISSLQYSSDINADSLEPD--------QSEDFQTVLGLKYLPSWPAVNLQFS 57
            |....||..|....:||       |.|.||.|        ...:|........||...|||::|.
  Rat    23 MTEPKSVCVSVDEVVSS-------NVDELETDLLNGHLKKVDNNFTEAQRFSSLPRRAAVNIEFK 80

  Fly    58 ELCYVVPDQTNASKT--KTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLAGFGAVCESGEILV 120
            :|.|.||:.....|.  ||:|:.::|.|:|.||.||:|||||||:||:|:|||:......|.:|:
  Rat    81 DLSYSVPEGPWWRKKGYKTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGYRETGMKGAVLI 145

  Fly   121 NNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLEVIDEILGMLRLKD 185
            |..|||:|.|||:|.||||.|:|....||.|.|:::|:|||.::  .:.:.|::.|||..|.|..
  Rat   146 NGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQEK--DEGRREMVKEILTALGLLP 208

  Fly   186 TLNTMAQKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSI 250
            ..||....||||:||||.|||||||||||:|.||||:|||..|..|.::|:|.||.|||:::|:|
  Rat   209 CANTRTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTI 273

  Fly   251 HTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFIIEVACLEYGGSYH 315
            |.||||:||:.|.:|||::|||||:||.||:||:|::.||.||..:|||||::|||..|| |..:
  Rat   274 HQPSAKLFELFDQLYVLSQGQCVYRGKVSNLVPYLRDLGLNCPTYHNPADFVMEVASGEY-GDQN 337

  Fly   316 EPMVEAV--------------GNGKV--ARWSPPAVEGETTTTKTDTTS--GASSFYERDQFDEE 362
            ..:|.||              |:|.|  ..|..||.|        |:.|  |..||         
  Rat   338 SRLVRAVREGMCDSDYKRELGGDGDVNPFLWHRPAEE--------DSASMEGCHSF--------- 385

  Fly   363 ISPKLLEAKCSWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFN 427
                  .|.|  ..|:.:|..|..:.:.||.....|:...:|.:.||:|.||.|:|..|.|.|.|
  Rat   386 ------SASC--LTQFCILFKRTFLSIMRDSVLTHLRITSHIGIGLLIGLLYLGIGNEAKKVLSN 442

  Fly   428 FGFMFTIVIAYLYLPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKLPSMFILAVIYLS 492
            .||:|..::..::..:||.:|.||.|:::..||:.|.||.|.:||.|...:.:|...:..|.|.|
  Rat   443 SGFLFFSMLFLMFAALMPTVLTFPLEMSVFLREHLNYWYSLKAYYLAKTMADVPFQIMFPVAYCS 507

  Fly   493 IVYLMSSQPLEWFRFAMLFTIAFVTALTSDSFGLLI-SSRLSLVNAMFMGPVLAVPLILLSIYGI 556
            |||.|:|||.:..||.:...:..:|:|.:.|.|||| ::..||..|.|:|||.|:|::|.|.:.:
  Rat   508 IVYWMTSQPSDAVRFVLFAALGTMTSLVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFV 572

  Fly   557 GYGGGTYISPLMRFLMHLSYLRHSMEGLVASLYDYGRADTICEDTEIFCSFKKSKVLLAFLGFEN 621
            .:   ..|...::::.::||:|:..||::.|:|...|.|..|:..|. |.|:||:.:|..|..||
  Rat   573 SF---DTIPTYLQWMSYISYVRYGFEGVILSIYGLDREDLHCDIAET-CHFQKSEAILRELDVEN 633

  Fly   622 MHYLWSLSCLMSFYLLFTVAAYFMIRLRLK 651
            .........|..|::...:.|||::|.:::
  Rat   634 AKLYLDFIVLGIFFISLRLIAYFVLRYKIR 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 119/226 (53%)
3a01204 67..654 CDD:273361 243/606 (40%)
ABC2_membrane 381..587 CDD:279410 72/206 (35%)
Abcg1NP_445954.2 3a01204 60..666 CDD:273361 254/636 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335085
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.810

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