DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4822 and ABCG10

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_175734.1 Gene:ABCG10 / 841761 AraportID:AT1G53270 Length:590 Species:Arabidopsis thaliana


Alignment Length:615 Identity:171/615 - (27%)
Similarity:288/615 - (46%) Gaps:84/615 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 QFSELCYVVPDQTNASKTKTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLAG---FGAVCESG 116
            :||.||.::.::    :.|.||:.|:....|.|:|||.|||||||||||.:|||   .|.|  ||
plant    34 KFSNLCGLLSEK----EEKVILKDVSCDARSAEITAIAGPSGAGKTTLLEILAGKVSHGKV--SG 92

  Fly   117 EILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKL-GKELNLKQKLEVIDEILGM 180
            ::|||..|.|...:|::|.::.|.|.|....||.|.:..:|.|:| .|..:...|::.:.:.||:
plant    93 QVLVNGRPMDGPEYRRVSGFVPQEDALFPFLTVQETLTYSALLRLKTKRKDAAAKVKRLIQELGL 157

  Fly   181 LRLKDTLNTMAQK--LSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLK-VLAAG 242
            ..:.|:......:  :|||||:|:.|.:|||::|.||.:||||:|||..|:.|.:.||| :....
plant   158 EHVADSRIGQGSRSGISGGERRRVSIGVELVHDPNVILIDEPTSGLDSASALQVVTLLKDMTIKQ 222

  Fly   243 GRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFIIEVAC 307
            |:|::.:||.|..:|.|.:|.:.:|:.|..|..|...::...:|..|...|...|..::.|::| 
plant   223 GKTIVLTIHQPGFRILEQIDRIVLLSNGMVVQNGSVYSLHQKIKFSGHQIPRRVNVLEYAIDIA- 286

  Fly   308 LEYGGSYHEPM-------VEAVGNGKVARWSPPAVEGETTTTKTDTTSGASSFYERDQFDEEISP 365
                ||. ||:       :...|:.|              |.|:...|.....::.|..    |.
plant   287 ----GSL-EPIRTQSCREISCYGHSK--------------TWKSCYISAGGELHQSDSH----SN 328

  Fly   366 KLLEAKCSWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKA-LFNFG 429
            .:||       :.::|..|....::|.|.....:.....:..|::||:|..:|....:| :...|
plant   329 SVLE-------EVQILGQRSCKNIFRTKQLFTTRALQASIAGLILGSIYLNVGNQKKEAKVLRTG 386

  Fly   430 FMFTIVIAYLYLPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKLPSMFILAVIYLSIV 494
            | |..::.:|.......|..|..:..:|.||.:.:.||:.||..|.....:|.:.|:::::.:.|
plant   387 F-FAFILTFLLSSTTEGLPIFLQDRRILMRETSRRAYRVLSYVLADTLIFIPFLLIISMLFATPV 450

  Fly   495 YLMSSQPLEWFRFAMLFTIAFVTALTSDSFGLLISSRLSLVNAMFMGPVLAVPLI----LLSIYG 555
            |.:.....|...|.....:.::..|.|:||....|   :||....||..:...|:    |.|.|.
plant   451 YWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFS---ALVPNFIMGTSVISGLMGSFFLFSGYF 512

  Fly   556 IGYGGGTYISPLMRFLMHLSYLRHSMEGLVASLYDYGRADTICEDTEIFCSFKKSKVLLAFLGFE 620
            |   ....|.....|:.:||..::..|.|:.:.|   |.|...:..::    |:|:         
plant   513 I---AKDRIPVYWEFMHYLSLFKYPFECLMINEY---RGDVFLKQQDL----KESQ--------- 558

  Fly   621 NMHYLWS-LSCLMSFYLLFTVAAYFMIRLR 649
                .|| |..:.||.:.:.|..:|::..|
plant   559 ----KWSNLGIMASFIVGYRVLGFFILWYR 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 88/227 (39%)
3a01204 67..654 CDD:273361 167/603 (28%)
ABC2_membrane 381..587 CDD:279410 50/210 (24%)
ABCG10NP_175734.1 3a01204 27..589 CDD:273361 171/615 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I1855
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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