DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and ABCG40

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_173005.1 Gene:ABCG40 / 838122 AraportID:AT1G15520 Length:1423 Species:Arabidopsis thaliana


Alignment Length:664 Identity:179/664 - (26%)
Similarity:306/664 - (46%) Gaps:98/664 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LPSWPAVNLQFSELCYVVP------DQTNASKTKTILRRVNGMFHSHELTAIIGPSGAGKTTLLN 104
            ||..|. ::.|..:.|.|.      :|........:|:.|||.|....|||::|.||||||||::
plant   818 LPFEPH-SITFDNVVYSVDMPQEMIEQGTQEDRLVLLKGVNGAFRPGVLTALMGVSGAGKTTLMD 881

  Fly   105 LLAG--FGAVCESGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNL 167
            :|||  .|...: |.|.::..|::.:.|.::|.|..|||:.....||.|.::.:|.|:|.||::.
plant   882 VLAGRKTGGYID-GNITISGYPKNQQTFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPKEVDK 945

  Fly   168 KQKLEVIDEILGMLRLKDTLNTMA-----QKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDL 227
            .::...|:|::.::.|......:.     ..||..:||||.||:|||.||.:||:||||:|||..
plant   946 NKRKIFIEEVMELVELTPLRQALVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1010

  Fly   228 SSSQCIALLKVLAAGGRTVICSIHTPSAKIFEMLDAVYVLAE-GQCVYQG----KGSNIVPFLKN 287
            :::..:..::.....||||:|:||.||..|||..|.:::|.. |:.:|.|    :.::::.:.::
plant  1011 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGEEIYVGPLGHESTHLINYFES 1075

  Fly   288 FGLCCPIT--YNPADFIIEVACLEYGGSYHEPMVEAVGNGKVARWSPPAVEGETTTTKTDTTSGA 350
            ......||  ||||.:::||:......:......:...|.::.:.:.     |.....:....|:
plant  1076 IQGINKITEGYNPATWMLEVSTTSQEAALGVDFAQVYKNSELYKRNK-----ELIKELSQPAPGS 1135

  Fly   351 SSFYERDQFDEEISPKLLEAKCSWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYF 415
            ...|...|:.:..   |.:...|.|.|:        ...||:..|..::|...|.:||:.|::::
plant  1136 KDLYFPTQYSQSF---LTQCMASLWKQH--------WSYWRNPPYTAVRFLFTIGIALMFGTMFW 1189

  Fly   416 GMG--TSASKALFN-FGFMFTIVIAYLYL----PMMPVLLYFPTEINLLKREYNNQWYRLSSYYA 473
            .:|  |...:.|.| .|.|:|.|: :|.|    .:.||:   ..|..:..||.....|....|..
plant  1190 DLGGKTKTRQDLSNAMGSMYTAVL-FLGLQNAASVQPVV---NVERTVFYREQAAGMYSAMPYAF 1250

  Fly   474 AMVTSKLPSMFILAVIYLSIVYLMSSQPLEWFRFAMLFTIAFV--TALTSDSFGLLISSRLSLVN 536
            |.|..::|.:.:.|::|..|||.|..  .||......:.:.|:  :.||...:|::         
plant  1251 AQVFIEIPYVLVQAIVYGLIVYAMIG--FEWTAVKFFWYLFFMYGSFLTFTFYGMM--------- 1304

  Fly   537 AMFMGPVLAVPLILLS-IYGIG--YGGGTYISPLM----RFLMHLSYLRHSMEGLVASLYDYGRA 594
            |:.|.|...:..::.| .|||.  :.|.....|.|    .:...|..:..::.||:||  .:|..
plant  1305 AVAMTPNHHIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIAS--QFGDI 1367

  Fly   595 DTICEDTEIFCSFKKSKVLLAFLGFENMHYLWSLSCL-MSFYLLFTVAAYFMIRLRLKHSEVSPI 658
            .....|:.:  |.|  :.:..|.|:.. .:|..::.: :.|.|||.|                 |
plant  1368 TEPMADSNM--SVK--QFIREFYGYRE-GFLGVVAAMNVIFPLLFAV-----------------I 1410

  Fly   659 FAYVIQLLTKYFNF 672
            ||..|    |.|||
plant  1411 FAIGI----KSFNF 1420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 83/238 (35%)
3a01204 67..654 CDD:273361 164/617 (27%)
ABC2_membrane 381..587 CDD:279410 53/221 (24%)
ABCG40NP_173005.1 PLN03140 10..1423 CDD:215599 179/664 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100151
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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