DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4822 and ABCG27

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001319729.1 Gene:ABCG27 / 824396 AraportID:AT3G52310 Length:743 Species:Arabidopsis thaliana


Alignment Length:672 Identity:185/672 - (27%)
Similarity:325/672 - (48%) Gaps:76/672 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ISSLQYSSDINADSLEPDQSEDFQTVLGLKYLPSWPAVNLQFSELCYVVPDQ-TNASKTKTILRR 78
            |:|.:.|:|...:.:|...|    :|:..:..|::| :.|:|.::.|.|..: ..:|..|:||..
plant   113 IASERCSNDDILEDIEAATS----SVVKFQAEPTFP-IYLKFIDITYKVTTKGMTSSSEKSILNG 172

  Fly    79 VNGMFHSHELTAIIGPSGAGKTTLLNLLAG-FGAVCESGEILVNNSPRDMRVFRKMSRYIMQTDV 142
            ::|..:..||.|::||||:|||||||.|.| |......|.:..|:.|....:..::. ::.|.||
plant   173 ISGSAYPGELLALMGPSGSGKTTLLNALGGRFNQQNIGGSVSYNDKPYSKHLKTRIG-FVTQDDV 236

  Fly   143 LDSQFTVLEMMILAANLKLGKELNLKQK----LEVIDEILGMLRLKDTL--NTMAQKLSGGERKR 201
            |....||.|.:...|.|:|.|.|..::|    ..||.| ||:.|.:||:  .:..:.:|||||||
plant   237 LFPHLTVKETLTYTALLRLPKTLTEQEKEQRAASVIQE-LGLERCQDTMIGGSFVRGVSGGERKR 300

  Fly   202 LCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAKIFEMLDAVYV 266
            :||..|::.||.::.|||||:.||..::.:.:.:|..:|..|:|::.:||.||:::|...|.:.|
plant   301 VCIGNEIMTNPSLLLLDEPTSSLDSTTALKIVQMLHCIAKAGKTIVTTIHQPSSRLFHRFDKLVV 365

  Fly   267 LAEGQCVYQGKGSNIVPFLKNFGLCCP-ITYNPADFIIEVACLEYGGSYHEPMVEAVGNGKVARW 330
            |:.|..:|.||.|..:.:..:.| |.| :..|||:|::::.    .|:.::..|.:....|:...
plant   366 LSRGSLLYFGKASEAMSYFSSIG-CSPLLAMNPAEFLLDLV----NGNMNDISVPSALKEKMKMX 425

  Fly   331 SPPAVEGETTTTKTDTTSGASSFYERD-------------QFDEEIS-----PKLLEAKCSWWLQ 377
            :..:..|.:....|.........|:..             ..|||:.     || .|...|||.|
plant   426 NSCSEIGSSKPAPTVVYEYLEEAYKTQIAVMEKMKLMAPVPLDEEVKLMITCPK-REWGLSWWEQ 489

  Fly   378 YKLLLVRMLIQMWRDKSYIK-LKFYMNIVLALLVGSLYFGMGTSASKALFN-FGFMFTIVIAYLY 440
            |.||.:|.:.:  |...|.. |:....:..|:::|.|::....::.|.|.: .|.:|.|.:.:.:
plant   490 YCLLSLRGIKE--RRHDYFSWLRVTQVLSTAIILGLLWWQSDITSXKGLQDQVGLLFFIAVFWGF 552

  Fly   441 LPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKLPSMFILAVIYLSIVYLMSSQPLEWF 505
            .|:...:..||.|..:|.:|..:..||||:|:.|..||.||...||.|::|.:||.|:...|...
plant   553 FPVFTAIFTFPQERAMLSKERESNMYRLSAYFVARTTSDLPLDLILPVLFLVVVYFMAGLRLRAE 617

  Fly   506 RFAMLFTIAFVTALTSDSFGLLI-SSRLSLVNAMFMGPVLAVPLILLSIYGIGYGGGTYISPL-- 567
            .|.:.....|:..:.:...||.| :|.:.|..|..:..|..:..:|        .||.::..:  
plant   618 SFFLSVLTVFLCIVAAQGLGLAIGASLMDLKKATTLASVTVMTFML--------AGGYFVKKVPF 674

  Fly   568 -MRFLMHLSYLRHSMEGLVASLYDYGRADTICEDTEIFCSFKKSKVLLAFLGFENMHYLWSLSCL 631
             :.::..:|:..|:.:.||...|:                    :::.:..|.|....|..:|.|
plant   675 FIAWIRFMSFNYHTYKLLVKVQYE--------------------EIMESVNGEEIESGLKEVSAL 719

  Fly   632 MSFYLLFTVAAYFMIRLRLKHS 653
            ::..:.:.:.|||.:|....||
plant   720 VAMIIGYRLVAYFSLRRMKLHS 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 83/232 (36%)
3a01204 67..654 CDD:273361 172/619 (28%)
ABC2_membrane 381..587 CDD:279410 53/211 (25%)
ABCG27NP_001319729.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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