DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4822 and ABCG1

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_181467.1 Gene:ABCG1 / 818520 AraportID:AT2G39350 Length:740 Species:Arabidopsis thaliana


Alignment Length:636 Identity:148/636 - (23%)
Similarity:268/636 - (42%) Gaps:116/636 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METASSVKGSTTSQISSLQYSSDINA----------DSLEPDQSEDFQTVLGLKYLPSWPAVNLQ 55
            :.|.||:..||..|:  |:..||:..          :||..|.::.        |:.:.|.| |.
plant    15 LNTISSIHDSTLGQL--LKNVSDVRKMAIGDETPVHESLNQDYNDG--------YMRTVPFV-LS 68

  Fly    56 FSELCYVV-------------------PD--QTNASKTKTILRRVNGMFHSHELTAIIGPSGAGK 99
            |..|.|.|                   |:  ||...||||:|..::|.....|:.|::|.||:||
plant    69 FDNLTYNVSVRPKLDFRNLFPRRRTEDPEIAQTARPKTKTLLNNISGETRDGEIMAVLGASGSGK 133

  Fly   100 TTLLNLLA---GFGAVCESGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKL 161
            :||::.||   ..|::  .|.:.:|......|:.:.:|.|:||.|:|....||.|.::.||..:|
plant   134 STLIDALANRIAKGSL--KGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRL 196

  Fly   162 GKELNLKQKLEVIDEILGMLRLKDTLNTMA-----QKLSGGERKRLCIALELVNNPPVIFLDEPT 221
            .:.|...:|...:..::..|.:::...|:.     :.:|||||:|:.|.::::::|.::||||||
plant   197 PRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPT 261

  Fly   222 TGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLK 286
            :|||..|:...:.:||.:|..|..||.|||.||.::..:||.:..|:.|..||.|..:::..|..
plant   262 SGLDSTSAFMVVKVLKRIAQSGSIVIMSIHQPSHRVLGLLDRLIFLSRGHTVYSGSPASLPRFFT 326

  Fly   287 NFGLCCPITYNPADFIIEV------------ACLEYGGSYH------------------------ 315
            .||...|...|..:|.:::            ..:|:...:.                        
plant   327 EFGSPIPENENRTEFALDLIRELEGSAGGTRGLIEFNKKWQEMKKQSNRQPPLTPPSSPYPNLTL 391

  Fly   316 -EPMVEAVGNGKVARWSPPAVEGETTTTKTDTTSGASSFYERDQFDEEISPKLLEAKCSWWLQYK 379
             |.:..::..||:.........|..||  ..||....:|         .:|        .|::.|
plant   392 KEAIAASISRGKLVSGGESVAHGGATT--NTTTLAVPAF---------ANP--------MWIEIK 437

  Fly   380 LLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFNFGFMFTIVIAYLYLPMM 444
            .|..|.::...|......::....::...::.::::.:..|........|| |...::.::....
plant   438 TLSKRSMLNSRRQPELFGIRIASVVITGFILATVFWRLDNSPKGVQERLGF-FAFAMSTMFYTCA 501

  Fly   445 PVLLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKLPSMFILAVIYLSIVYLMSSQPLEWFRFAM 509
            ..|..|..|..:..||.....||.|||..:......||:..|:|.:.:..|.  :..|:.....:
plant   502 DALPVFLQERYIFMRETAYNAYRRSSYVLSHAIVSFPSLIFLSVAFAATTYW--AVGLDGGLTGL 564

  Fly   510 LFTIAFVTA--LTSDSFGLLISSRLSLVNAMFMGPVLAVPLILLSIYGIGY 558
            ||....:.|  .:..||...:|   .:|.::.:|..:.|.::...:...|:
plant   565 LFYCLIILASFWSGSSFVTFLS---GVVPSVMLGYTIVVAILAYFLLFSGF 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 81/253 (32%)
3a01204 67..654 CDD:273361 126/539 (23%)
ABC2_membrane 381..587 CDD:279410 33/180 (18%)
ABCG1NP_181467.1 3a01204 106..739 CDD:273361 124/534 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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