DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4822 and ABCG2

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_181272.1 Gene:ABCG2 / 818312 AraportID:AT2G37360 Length:755 Species:Arabidopsis thaliana


Alignment Length:657 Identity:149/657 - (22%)
Similarity:283/657 - (43%) Gaps:134/657 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ETASSVKGSTTSQISSLQYSSDINADSLEPDQSEDFQTVLGLKYLPSWPAVNLQFSELCYVVPDQ 66
            |:|||......|.|:|.  :|..|:.:..|..|           :.|.|.| |.|::|.|.|..|
plant    60 ESASSRALGIASPINSA--ASSFNSWASAPASS-----------ISSSPFV-LSFTDLTYSVKIQ 110

  Fly    67 --------------TNASKTKTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLAG-------FG 110
                          .::..||.:|..::|.....|:.|::|.||:||:||::.||.       .|
plant   111 KKFNPLACCRRSGNDSSVNTKILLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKDSLRG 175

  Fly   111 AVCESGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLEVID 175
            ::..:||:|      :..:.:.:|.|:||.|:|....||.|.::.:|..:|.:.|:.|:|...:.
plant   176 SITLNGEVL------ESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQ 234

  Fly   176 EILGMLRLKDTLNTMA-----QKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIAL 235
            .::..|.|:....|:.     :.:|||||:|:.|..:::::|.::||||||:|||..|:...|.:
plant   235 ALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTSAYMVIKV 299

  Fly   236 LKVLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPAD 300
            |:.:|..|..||.|||.||.:|..:||.:..|::|..||.|..:::..|...|....|...|..:
plant   300 LQRIAQSGSIVIMSIHQPSYRIMGLLDQLIFLSKGNTVYSGSPTHLPQFFSEFKHPIPENENKTE 364

  Fly   301 FIIE-VACLEYGGSYHEPMVE--------------------------------AVGNGKVARWSP 332
            |.:: :..|||.....:|:||                                ::..||:     
plant   365 FALDLIRELEYSTEGTKPLVEFHKQWRAKQAPSYNNNNKRNTNVSSLKEAITASISRGKL----- 424

  Fly   333 PAVEGETTTTKTDTTSGASSFYERDQFDEEISPKLLEAKCSWWLQYKLLLVRMLIQMWRDKSYIK 397
              |.|.|....::.|....:|         .:|        :|::..::..|.::...|....:.
plant   425 --VSGATNNNSSNLTPSFQTF---------ANP--------FWIEMIVIGKRAILNSRRQPELLG 470

  Fly   398 LKFYMNIVLALLVGSLYFGMGTSASKALFNFGFMFTIVIAYLYLPMMPVLLYFPTEINLLKREYN 462
            ::....:|..:::.:::..:..|...|....|| |...::..:......:..|..|..:..||..
plant   471 MRLGAVMVTGIILATMFTNLDNSPKGAQERLGF-FAFAMSTTFYTCAEAIPVFLQERYIFMRETA 534

  Fly   463 NQWYRLSSYYAAMVTSKLPSMFILAVIYLSIVYLM-----SSQPLEWFRFAMLFTI----AFVTA 518
            ...||.|||..:.....:|::.:|:..:.:..:..     .:....:|.|.:|.:.    :|||.
plant   535 YNAYRRSSYVLSQSIISIPALIVLSASFAATTFWAVGLDGGANGFFFFYFTILASFWAGSSFVTF 599

  Fly   519 LTSDSFGLLISSRLSLVNAMFMGPVLAVPLILLSIYGIGYGGGTYIS----PLMRFLMH-LSYLR 578
            |:            .::..:.:|..:.|.::...:...|:    :||    |:.....| :|.::
plant   600 LS------------GVIPNVMLGFTVVVAILAYFLLFSGF----FISRDRIPVYWLWFHYISLVK 648

  Fly   579 HSMEGLV 585
            :..||::
plant   649 YPYEGVL 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 79/250 (32%)
3a01204 67..654 CDD:273361 129/578 (22%)
ABC2_membrane 381..587 CDD:279410 36/219 (16%)
ABCG2NP_181272.1 3a01204 95..754 CDD:273361 137/609 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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