DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4822 and ABCG34

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_181179.2 Gene:ABCG34 / 818211 AraportID:AT2G36380 Length:1453 Species:Arabidopsis thaliana


Alignment Length:645 Identity:176/645 - (27%)
Similarity:285/645 - (44%) Gaps:104/645 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LPSWPAVNLQFSELCYVV--PDQTNASKTK----TILRRVNGMFHSHELTAIIGPSGAGKTTLLN 104
            ||..| ::|.|:.:.|.|  |.:..|...:    .:||.|.|.|....|||::|.||||||||::
plant   845 LPFQP-LSLAFNNVNYYVDMPAEMKAQGVEGDRLQLLRDVGGAFRPGVLTALVGVSGAGKTTLMD 908

  Fly   105 LLAG--FGAVCESGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNL 167
            :|||  .|...| |.|.::..|::...|.::|.|..|.|:.....||.|.:|.:|.|:|..:::.
plant   909 VLAGRKTGGYVE-GSINISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLIYSAWLRLSADIDT 972

  Fly   168 KQKLEVIDEILGMLRLKDTLNTM-----AQKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDL 227
            |.:...::|::.::.||...|::     ...||..:||||.||:|||.||.:||:||||:|||..
plant   973 KTREMFVEEVMELVELKPLRNSIVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1037

  Fly   228 SSSQCIALLKVLAAGGRTVICSIHTPSAKIFEMLDAVYVLAE-GQCVYQG-------------KG 278
            :::..:..::.....||||:|:||.||..|||..|.:.::.. ||.:|.|             :.
plant  1038 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGQVIYAGTLGHHSQKLVEYFEA 1102

  Fly   279 SNIVPFLKNFGLCCPITYNPADFIIEVACLEYGGSYHEPMVEAVGNGKVARWSPPAVEGETTTTK 343
            ...||.:|:       .||||.::::|..............:...|..|.|.:...::..:|   
plant  1103 IEGVPKIKD-------GYNPATWMLDVTTPSMESQMSVDFAQIFVNSSVNRRNQELIKELST--- 1157

  Fly   344 TDTTSGASSFYERDQFDEEISPKLLEAKCSWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLAL 408
              ...|::..|.|.::.:..|   .:.|..:|        :|....||...|..::|.|.:|:.:
plant  1158 --PPPGSNDLYFRTKYAQPFS---TQTKACFW--------KMYWSNWRYPQYNAIRFLMTVVIGV 1209

  Fly   409 LVGSLYFGMGTSASKA--LFN-FGFMFTIVIAYLYLPMMPVLLYFPT---EINLLKREYNNQWYR 467
            |.|.|::..||...|.  |.| ||.|:.   |.|:|.........|.   |..:..||.....|.
plant  1210 LFGLLFWQTGTKIEKEQDLNNFFGAMYA---AVLFLGATNAATVQPAVAIERTVFYREKAAGMYS 1271

  Fly   468 LSSYYAAMVTSKLPSMFILAVIYLSIVYLM-----SSQPLEWFRFAMLFTIAFVT-------ALT 520
            ...|..:.|..::....|...:|..|:|.|     :.....||.:.||....:.|       |||
plant  1272 AIPYAISQVAVEIMYNTIQTGVYTLILYSMIGYDWTVVKFFWFYYYMLTCFVYFTLYGMMLVALT 1336

  Fly   521 SD--SFGLLISSRLSLVNAMFMGPVLAVPLILLSIYGIGYGGGTYISPL-MRFLMHLSYLRHSME 582
            .:  ..|:.:|..||..| :|.|.::..|.|                |: .|:....|.:..::.
plant  1337 PNYQIAGICLSFFLSFWN-LFSGFLIPRPQI----------------PIWWRWYYWASPVAWTLY 1384

  Fly   583 GLVASLYDYGRADTICEDTEIFCSFKKSKVLLAFLGFEN--------MHYLWSLSCLMSF 634
            |::.|  ..|..|:|...|.:.....|:.:...| ||:.        :|..|.|..|.:|
plant  1385 GIITS--QVGDRDSIVHITGVGDMSLKTLLKNGF-GFDYDFLPVVAVVHIAWILIFLFAF 1441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 86/238 (36%)
3a01204 67..654 CDD:273361 168/622 (27%)
ABC2_membrane 381..587 CDD:279410 54/226 (24%)
ABCG34NP_181179.2 PLN03140 11..1453 CDD:215599 176/645 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100151
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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