DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and abcg4b

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001104682.1 Gene:abcg4b / 794238 ZFINID:ZDB-GENE-080215-10 Length:644 Species:Danio rerio


Alignment Length:624 Identity:239/624 - (38%)
Similarity:353/624 - (56%) Gaps:49/624 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YLPSWPAVNLQFSELCYVVPDQTNASKT--KTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLA 107
            :||....|.|:|.||||.:.:.....|.  |.:|:.::|.|.|.||..|:|||||||:||:|:||
Zfish    50 HLPKRTTVELEFKELCYTIREGPWWKKQGYKALLKCLSGKFSSRELIGIMGPSGAGKSTLMNILA 114

  Fly   108 GFGAVCESGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLE 172
            |:.....:|:||||...||.|.|||||.||||.|.|....:|.|.|:::|||||.:...:|:  |
Zfish   115 GYRETGMTGQILVNGKLRDPRTFRKMSCYIMQEDKLLPHLSVQEAMMVSANLKLNESSEVKK--E 177

  Fly   173 VIDEILGMLRLKDTLNTMAQKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLK 237
            :|.|||..|.|.:.::|....||||:.|||.|||||||||||:|.||||:|||..|..|.::|:|
Zfish   178 LIKEILTALGLHECVHTRTVSLSGGQCKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMK 242

  Fly   238 VLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFI 302
            .||.||||:||:||.||||:|||.|.:|:|::|||:|:|....::|:|:..||.||..:||||||
Zfish   243 SLAQGGRTIICTIHQPSAKLFEMFDKLYILSQGQCIYKGSVPYLIPYLRGLGLHCPTYHNPADFI 307

  Fly   303 IEVACLEYGGSYHEPMVEAVGNGKVARWSPPAVEGETTTTKTDTTSGASSFYERDQFDEEISPKL 367
            ||||..|| |..:..:.|||..|..|     ..|......||..||.|                 
Zfish   308 IEVASGEY-GDLNPVLFEAVQGGMCA-----LEEKCNCIDKTTVTSCA----------------- 349

  Fly   368 LEAKC--------------SWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMG 418
              |||              |...|:.:|..|..|.:.||:....|:...:|.:.:|:|.||..:|
Zfish   350 --AKCVKDPGHVESHTFATSSLTQFCILFKRTFITICRDQVLTHLRLMSHISIGVLIGLLYLNIG 412

  Fly   419 TSASKALFNFGFMFTIVIAYLYLPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKLPSM 483
            ..|||...|.||:|..::..::..:||.:|.||.|:.:..||:.|.||.|.:||.|...:.:|..
Zfish   413 NDASKVFNNTGFLFFSMLFLMFGALMPTVLTFPLEMAVFLREHLNYWYSLKAYYLAKTMADIPFQ 477

  Fly   484 FILAVIYLSIVYLMSSQPLEWFRFAMLFTIAFVTALTSDSFGLLI-SSRLSLVNAMFMGPVLAVP 547
            .:..::|.||||.|:.||.|..|:.:...::..|||.:.|.|||: ::..||..|.|:|||..:|
Zfish   478 VLCPIMYCSIVYWMTEQPPEASRYLLFLALSICTALVAQSLGLLVGAASTSLQVATFVGPVTGIP 542

  Fly   548 LILLSIYGIGYGGGTYISPLMRFLMHLSYLRHSMEGLVASLYDYGRADTICEDTEIFCSFKKSKV 612
            ::|.|.:.:.:   ..|...:::..::||:|:..|.::.|:|...|.:..|...  .|.|::.:.
Zfish   543 VLLFSGFFVNF---DTIPEYLQWSSYVSYVRYGFEEVILSIYGMNRTERECPGR--VCKFQRPEE 602

  Fly   613 LLAFLGFENMHYLWSLSCLMSFYLLFTVAAYFMIRLRLK 651
            :|..|..|:.........|..|:::..:|.|.::|.::|
Zfish   603 VLQLLDVEDAKLYMDFIVLGIFFVILRLATYVVLRYKIK 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 119/226 (53%)
3a01204 67..654 CDD:273361 230/602 (38%)
ABC2_membrane 381..587 CDD:279410 67/206 (33%)
abcg4bNP_001104682.1 3a01204 42..644 CDD:273361 239/624 (38%)
ABCG_EPDR 57..281 CDD:213180 119/225 (53%)
ABC2_membrane 375..574 CDD:279410 66/201 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574362
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177791at33208
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.810

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