DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and abcg2

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:XP_012819987.2 Gene:abcg2 / 734088 XenbaseID:XB-GENE-991895 Length:682 Species:Xenopus tropicalis


Alignment Length:662 Identity:166/662 - (25%)
Similarity:307/662 - (46%) Gaps:146/662 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 KTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLA------GFGAVCESGEILVNNSPRDMRVFR 131
            :.||..|||:... .|.||:||:|:||::||::||      |.     ||::||:..|:... |:
 Frog    80 RVILNDVNGIMRP-GLNAILGPTGSGKSSLLDVLAARKDPNGL-----SGQVLVDGEPQPSN-FK 137

  Fly   132 KMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLEVIDEI---LGMLRLKDTL--NTMA 191
            .:|.|::|.||:....::.|.:..:|.|:|.:.:..|:|.|.|:::   ||:.::.|:.  ....
 Frog   138 CLSGYVVQDDVVMGTLSIRENLQFSAALRLPRSVKQKEKDERINQVIKELGLTKVADSKVGTQFI 202

  Fly   192 QKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAK 256
            :.:|||||||..|.:||:.:|.::||||||||||..:::..:.|||.::..|:|:|.|||.|...
 Frog   203 RGVSGGERKRTNIGMELITDPGILFLDEPTTGLDASTANAVLLLLKRMSRQGKTIIFSIHQPRYS 267

  Fly   257 IFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFIIEVACLEYGGSYHEPMVEA 321
            ||.:.|::.:||.|:.::.|...:.:.:....|..|....|||||.:::                
 Frog   268 IFRLFDSLTLLAGGRLLFHGPSRDALDYFTGLGYECESHNNPADFFLDI---------------- 316

  Fly   322 VGNGKVARWSPPAVEGETTTTKTDTTSGASSFYERDQFDEEISPKLLE------AKCSWWLQYKL 380
                         :.|::|....:.........|:.:.::..|..::|      ...|::|:.|.
 Frog   317 -------------INGDSTAVALNKLEDVELENEQKEVNDNGSKTVVENLSEQFCTTSYYLETKA 368

  Fly   381 LLVRMLI--------------------------------QMWRDKSYIKLKFYMNIVLALLVGSL 413
            .|.:|.:                                .:||:......:..:.:||||:||::
 Frog   369 ELEKMSLGKKIKSNFFARQITYNTSFLHQLKWVCKRSFKNLWRNPQASIAQVMVTLVLALIVGAI 433

  Fly   414 YFGMGTSASKALFNFGFMFTIVIAYLYLPMMPVLLYFPTEINLLKREYNNQWYRLSSY-YAAMVT 477
            :||:....|......|.:|.:.....:..:..:.| |..|..:...||.:.:||||:| :|.:.|
 Frog   434 FFGVKEDVSGIQNRVGSLFFVTTNQCFSSVSAIEL-FIVEKKIFIHEYISGYYRLSAYFFAKLFT 497

  Fly   478 SKLPSMFILAVIYLSIVYLMSSQPLEWFR------FAMLFTIAFVTALTSDSFGLLISSRLSLVN 536
            ..||...:.::|:.|::|.|..     |:      |.|:||:..: |.|:.|..|.:::...   
 Frog   498 DLLPMRTLPSIIFTSVIYFMIG-----FKATAGAFFTMMFTLMMI-AYTAASMALAVAAGQD--- 553

  Fly   537 AMFMGPVLAVPLILLSI---YGIGYGG-GTYISPLMRFLMHLSYLRHSMEGLVA-SLYDY----- 591
                  |:||..:|::|   :.|.:.| ...::.:|.::..|.|......||.| .:.::     
 Frog   554 ------VVAVANLLMTICFVFMIIFSGLLVNLTSVMDWISWLKYFSIPRYGLTALQINEFTNLNF 612

  Fly   592 --GRADTI-----CEDTEIF--CSFKKSKVLLAFLGFENMHY----LW----SLSCLMSFYLLFT 639
              |...||     |..:..|  |:.::      :|..:.:.:    ||    :|:|:::.:|  |
 Frog   613 CNGLNTTIQGNPNCTGSSPFGTCTGEE------YLTVQGIDFSTWGLWQNHLALACMIAIFL--T 669

  Fly   640 VA---AYFMIRL 648
            :|   .|||.:|
 Frog   670 IAYLKLYFMKKL 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 77/213 (36%)
3a01204 67..654 CDD:273361 166/662 (25%)
ABC2_membrane 381..587 CDD:279410 55/249 (22%)
abcg2XP_012819987.2 3a01204 73..675 CDD:273361 162/654 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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