DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and abcg2c

DIOPT Version :9

Sequence 1:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:XP_005156580.1 Gene:abcg2c / 569858 ZFINID:ZDB-GENE-050517-37 Length:640 Species:Danio rerio


Alignment Length:619 Identity:173/619 - (27%)
Similarity:295/619 - (47%) Gaps:118/619 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SLEPDQSED-FQTVLGLKYLPSWPAVNLQFSELCYVVPDQTNAS----KTKTILRRVNGMFHSHE 87
            |.:.|:|.. |||          |...:.|.::.|.:.::....    :.|.||:.|:|:.:. .
Zfish    18 STDADESVPCFQT----------PGPTVTFHQIRYRIKERLGMFSCQWREKDILKDVSGIMNP-G 71

  Fly    88 LTAIIGPSGAGKTTLLNLLAG----FGAVCESGEILVNNS--PRDMRVFRKMSRYIMQTDVLDSQ 146
            :.||:||:|:|||:||:::||    .|  .:||::||:|:  ..|:|:   .|.|::|.|:|...
Zfish    72 MNAIMGPTGSGKTSLLDVIAGRKDPKG--LKSGQVLVDNTIVTSDLRL---CSAYVVQNDILMGT 131

  Fly   147 FTVLEMMILAANLKLG-KELNLKQKLEVIDEILGMLRLKDTLNT-----MAQKLSGGERKRLCIA 205
            .||.|.:..:|||:|. ||.:...|...::.::..|.|||..:|     ..:.:||||:||..|.
Zfish   132 LTVRENLAFSANLRLSLKEYSSSDKEMRVNSVIQELGLKDCADTKIGTMFLRGVSGGEKKRCSIG 196

  Fly   206 LELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEG 270
            :||:.:|.::||||||||||..:::..:.||:.::..|:|||.|||.|...||...|.:.::.:|
Zfish   197 MELITSPSLLFLDEPTTGLDANTANSIMELLQNISKKGKTVIFSIHQPRYSIFRQFDHLTLMNKG 261

  Fly   271 QCVYQGKGSNIVPFLKNFGLCCPITYNPADFIIEVA----------------CLEYGGSYHEPMV 319
            :.:|.|.....:.:.::.|..|....|||||.::|.                |     |..|.||
Zfish   262 EIIYAGAADKAIIYFEDLGYKCEPFNNPADFFLDVTNGTIRPHKSSNNISEKC-----SSSEEMV 321

  Fly   320 E-----AVGNGKVARWSP----------PAVEG-ETTTTKTDTTSGASSFYERDQFDEEISPKLL 368
            :     ||    :.|.||          ...:| :...||.|....|:.||              
Zfish   322 DNENPLAV----MYRKSPYFTKLKDRLTEISDGLDPEVTKGDKIGYATPFY-------------- 368

  Fly   369 EAKCSWWLQYKLLLV--RMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFN-FGF 430
                     |:||||  |.:..:.|:......:.::||...:|||.:|:.:..:..:||.| .|.
Zfish   369 ---------YQLLLVSGRTIRNILRNPQTSYAQLFLNIFFGILVGLIYYQIPHTLPEALQNRTGA 424

  Fly   431 MFTIVIAYLYLPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKL-PSMFILAVIYLSIV 494
            .|.:||..::..:..|.| |.:|..|...|.::.:||.|:|:.:.|.:.| |:..:...|:.:|.
Zfish   425 FFFLVINMVFGNLSAVEL-FVSERELFIHENSSGFYRTSAYFLSKVFADLIPNRILPVFIFSAIP 488

  Fly   495 YLMSSQPLEWFRFAMLFTIAFVTALTSDSFGLLISSRLSLVNAMFMGPVL-AVPLILLSIYGIGY 558
            |.|.....|...|.:......:.:|::.|...|:|:.   |.:..|..:| |:|.:.:.::    
Zfish   489 YFMMGLKPEVEAFFLYCVTMSMVSLSAVSLAFLVSAS---VGSFAMANILIALPYVFMMVF---- 546

  Fly   559 GGGTYISPLMRFLMHLSYLRHSMEGLVASLYDYG 592
              |.::..|...|..||:|:.      ||::.||
Zfish   547 --GGFLVNLNSMLSGLSWLKW------ASIFRYG 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 82/240 (34%)
3a01204 67..654 CDD:273361 164/579 (28%)
ABC2_membrane 381..587 CDD:279410 52/210 (25%)
abcg2cXP_005156580.1 ABCG_EPDR 34..267 CDD:213180 82/238 (34%)
3a01204 37..638 CDD:273361 166/590 (28%)
ABC2_membrane 377..579 CDD:279410 53/212 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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