DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4822 and abcg4a

DIOPT Version :10

Sequence 1:NP_608493.2 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster
Sequence 2:XP_687685.2 Gene:abcg4a / 564842 ZFINID:ZDB-GENE-050517-39 Length:641 Species:Danio rerio


Alignment Length:611 Identity:246/611 - (40%)
Similarity:366/611 - (59%) Gaps:22/611 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YLPSWPAVNLQFSELCYVVPDQT--NASKTKTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLA 107
            :||....|:|:|:||.|.:.:..  .....|.:|:.::|.|.|.||..|:|||||||:||:|:||
Zfish    46 HLPRRSTVDLEFTELSYTIREGPCWRRRGFKALLKCLSGKFCSRELIGIMGPSGAGKSTLMNILA 110

  Fly   108 GFGAVCESGEILVNNSPRDMRVFRKMSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLE 172
            |:......|:||||..|||:|.|||||.||||.|:|....|..|.|:::|||||.:  |::.|.|
Zfish   111 GYRETGMKGQILVNGRPRDLRTFRKMSCYIMQDDMLLPHLTTREAMMVSANLKLNE--NMEVKKE 173

  Fly   173 VIDEILGMLRLKDTLNTMAQKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLK 237
            :::|||..|.|::...|....||||:.|||.|||||||||||:|.||||:|||..|..|.::|:|
Zfish   174 LVNEILTALGLQECAQTRTISLSGGQCKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMK 238

  Fly   238 VLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFI 302
            .||.||||:||:||.||||:|||.|.:|:|::|||:|:|....::|:|||.||.||..:||||||
Zfish   239 SLAQGGRTIICTIHQPSAKLFEMFDKLYILSQGQCIYKGTVPYLIPYLKNLGLHCPTYHNPADFI 303

  Fly   303 IEVACLEYGGSYHEPMVEAVGNGKVARWSPPAVEGETTTTKTD-TTSGASSFYERDQFDEEISPK 366
            ||||..|| |..:..:.|||..|..:..|.     :.::.|.| |||..|..|....:.|:.:  
Zfish   304 IEVASGEY-GDLNPVLFEAVQGGLCSDDSK-----KNSSDKNDPTTSCPSQCYPDSGYIEKHT-- 360

  Fly   367 LLEAKCSWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFNFGFM 431
               ...|...|:.:|..|..|.:.||.....|:...::.:.:|:|.||..:|..|||...|.||:
Zfish   361 ---FATSTLTQFCILFKRTFITICRDVVLTHLRVMSHLCIGVLIGLLYLNIGNDASKVFNNTGFL 422

  Fly   432 FTIVIAYLYLPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKLPSMFILAVIYLSIVYL 496
            |..::..::..:||.:|.||.|:.:..||:.|.||.|.:||.|...:.:|...|..::|.||||.
Zfish   423 FFSMLFLMFAALMPTVLTFPLEMGVFIREHLNYWYSLKAYYLAKTMADIPFQVICPIMYCSIVYW 487

  Fly   497 MSSQPLEWFRFAMLFTIAFVTALTSDSFGLLI-SSRLSLVNAMFMGPVLAVPLILLSIYGIGYGG 560
            |:.||.|..|:.:...::..|||.:.|.|||| ::..||..|.|:|||.|:|::|.|.:.:.:  
Zfish   488 MTEQPPEAGRYLLFMALSTSTALVAQSLGLLIGAASTSLQVATFVGPVSAIPVLLFSGFFVNF-- 550

  Fly   561 GTYISPLMRFLMHLSYLRHSMEGLVASLYDYGRADTICEDTEIFCSFKKSKVLLAFLGFENMHYL 625
             ..|...:::..::||:|:..||::.|:|...|::..|..  |.|.|:|.:.:|..|..|:....
Zfish   551 -DTIPKYLQWSSYVSYVRYGFEGVILSIYGMNRSELECPG--IVCKFQKPEEVLQLLDVEDAKLY 612

  Fly   626 WSLSCLMSFYLLFTVAAYFMIRLRLK 651
            .....|..|:|:..:|.||::|.::|
Zfish   613 VDFMVLGVFFLVLRLATYFVLRYKVK 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4822NP_608493.2 3a01204 67..654 CDD:273361 238/589 (40%)
abcg4aXP_687685.2 3a01204 38..641 CDD:273361 246/611 (40%)

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